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Aliases for NPM1P27 Gene

Aliases for NPM1P27 Gene

  • Nucleophosmin 1 Pseudogene 27 2 3 5
  • Nucleophosmin 1 (Nucleolar Phosphoprotein B23, Numatrin) Pseudogene 27 2 3
  • Nucleophosmin (Nucleolar Phosphoprotein B23, Numatrin) Pseudogene 3

External Ids for NPM1P27 Gene

Previous GeneCards Identifiers for NPM1P27 Gene

  • GC05M093020

Summaries for NPM1P27 Gene

GeneCards Summary for NPM1P27 Gene

NPM1P27 (Nucleophosmin 1 Pseudogene 27) is a Pseudogene.

Additional gene information for NPM1P27 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NPM1P27 Gene

Genomics for NPM1P27 Gene

GeneHancer (GH) Regulatory Elements for NPM1P27 Gene

Promoters and enhancers for NPM1P27 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J093683 Promoter 0.5 Ensembl 600.7 +0.1 116 0.2 NPM1P27 MIR2277 FAM172A
GH05J093576 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 73.1 +100.7 100737 13.1 ZNF473 SP1 ELF3 CTCF CBFA2T2 ZNF148 ZNF121 ZNF384 ZSCAN21 ZBTB7A NR2F1 NPM1P27 NR2F1-AS1 POU5F2 MIR2277 FAM172A ENSG00000251023 PIR38533
GH05J093597 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE dbSUPER 12.2 +82.6 82576 7.5 SP7 PRDM1 MZF1 GLIS2 PKNOX1 CREB1 ZNF488 ZBTB8A ZNF600 LEF1 ENSG00000278905 NPM1P27 NR2F1 MIR2277
GH05J094469 Enhancer 1.1 Ensembl ENCODE 12.5 -787.1 -787078 3.4 ZNF121 ZSCAN21 SP7 MZF1 ZNF547 GLIS2 POLR2A PKNOX1 ZNF488 ZBTB8A NPM1P27 MTND5P12 KIAA0825 GC05P094260
GH05J093244 Enhancer 1.2 Ensembl ENCODE 12.1 +437.6 437602 2.5 ZNF652 ELF3 CEBPG RERE ZNF24 TFE3 SP7 HNF1A PPARG SP5 NPM1P27 POLD2P1 GC05P093190
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NPM1P27 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NPM1P27 Gene

Genomic Locations for NPM1P27 Gene
chr5:93,682,519-93,683,816
(GRCh38/hg38)
Size:
1,298 bases
Orientation:
Minus strand
chr5:93,018,346-93,019,522
(GRCh37/hg19)
Size:
1,177 bases
Orientation:
Minus strand

Genomic View for NPM1P27 Gene

Genes around NPM1P27 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NPM1P27 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NPM1P27 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NPM1P27 Gene

Proteins for NPM1P27 Gene

Post-translational modifications for NPM1P27 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NPM1P27 Gene

Domains & Families for NPM1P27 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NPM1P27 Gene

Function for NPM1P27 Gene

Phenotypes From GWAS Catalog for NPM1P27 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NPM1P27 Gene

Localization for NPM1P27 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NPM1P27 Gene

Pathways & Interactions for NPM1P27 Gene

PathCards logo

SuperPathways for NPM1P27 Gene

No Data Available

Interacting Proteins for NPM1P27 Gene

Gene Ontology (GO) - Biological Process for NPM1P27 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NPM1P27 Gene

Drugs & Compounds for NPM1P27 Gene

No Compound Related Data Available

Transcripts for NPM1P27 Gene

mRNA/cDNA for NPM1P27 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NPM1P27 Gene

No ASD Table

Relevant External Links for NPM1P27 Gene

GeneLoc Exon Structure for
NPM1P27
ECgene alternative splicing isoforms for
NPM1P27

Expression for NPM1P27 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NPM1P27 Gene

NURSA nuclear receptor signaling pathways regulating expression of NPM1P27 Gene:

NPM1P27
genes like me logo Genes that share expression patterns with NPM1P27: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NPM1P27 Gene

Orthologs for NPM1P27 Gene

Evolution for NPM1P27 Gene

ENSEMBL:
Gene Tree for NPM1P27 (if available)
TreeFam:
Gene Tree for NPM1P27 (if available)

No data available for Orthologs for NPM1P27 Gene

Paralogs for NPM1P27 Gene

No data available for Paralogs for NPM1P27 Gene

Variants for NPM1P27 Gene

Additional Variant Information for NPM1P27 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NPM1P27

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NPM1P27 Gene

Disorders for NPM1P27 Gene

No disorders were found for NPM1P27 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NPM1P27 Gene

Publications for NPM1P27 Gene

No publications were found for NPM1P27 Gene.

No data available for External Links for NPM1P27 Gene

Products for NPM1P27 Gene

Sources for NPM1P27 Gene

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