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NPM1P20 Gene(Pseudogene)

Nucleophosmin 1 Pseudogene 20

GCID:
GC14M101842
GIFtS:
11
Genes Participants
UDN Logo

Aliases for NPM1P20 Gene

Subcategory (RNA class) for NPM1P20 Gene

antisense

Aliases for NPM1P20 Gene

  • Nucleophosmin 1 Pseudogene 20 2 3
  • Nucleophosmin 1 (Nucleolar Phosphoprotein B23, Numatrin) Pseudogene 20 2
  • AL137779.3 5

External Ids for NPM1P20 Gene

ORGUL Members for NPM1P20 Gene

Previous GeneCards Identifiers for NPM1P20 Gene

  • GC14U900118
  • GC14M100299
  • GC14M101378
  • GC14M102308
  • GC14M082488

Summaries for NPM1P20 Gene

GeneCards Summary for NPM1P20 Gene

NPM1P20 (Nucleophosmin 1 Pseudogene 20) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for NPM1P20 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NPM1P20 Gene

Genomics for NPM1P20 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for NPM1P20 Gene

Promoters and enhancers for NPM1P20 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH14I101842 Enhancer 1.1 Ensembl ENCODE dbSUPER 550.8 -0.2 -240 3.9 CTCF EBF1 IRF4 RAD21 GATA3 POLR2A ZNF143 SMC3 BCLAF1 RUNX3 NPM1P20 ENSG00000258919 GC14P103276 PPP2R5C
GH14I101838 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.8 +4.5 4531 2.3 EBF1 BATF IRF4 POLR2A SCRT2 RCOR1 ETV6 BCLAF1 IKZF2 RUNX3 ENSG00000256705 ENSG00000258919 NPM1P20 PPP2R5C
GH14I101841 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.8 +2.6 2578 1.1 BCOR ZNF664 ZNF143 ZMYM3 KDM1A ZIC2 CHD2 ENSG00000258919 NPM1P20 ENSG00000256705 PPP2R5C
GH14I101874 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -33.3 -33298 6.2 PKNOX1 BATF KLF5 IRF4 ATF7 RCOR1 ETV6 FOS IKZF2 RUNX3 PPP2R5C ENSG00000271780 TECPR2 WDR20 GC14P103276 NPM1P20
GH14I101849 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -5.7 -5668 1 KLF1 PKNOX1 L3MBTL2 MNT ZNF592 POLR2A ZNF600 RUNX3 MGA PPP2R5C NPM1P20 GC14P103276
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around NPM1P20 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NPM1P20 Gene

Genomic Locations for NPM1P20 Gene
chr14:101,842,761-101,844,130
(GRCh38/hg38)
Size:
1,370 bases
Orientation:
Minus strand
chr14:102,309,098-102,310,467
(GRCh37/hg19)

Genomic View for NPM1P20 Gene

Genes around NPM1P20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NPM1P20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NPM1P20 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for NPM1P20 Gene

Proteins for NPM1P20 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for NPM1P20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NPM1P20 Gene

Domains & Families for NPM1P20 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NPM1P20 Gene

Function for NPM1P20 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NPM1P20 Gene

Localization for NPM1P20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NPM1P20 Gene

Pathways & Interactions for NPM1P20 Gene

SuperPathways for NPM1P20 Gene

PathCards logo More details on SuperPathways for NPM1P20
No Data Available

Interacting Proteins for NPM1P20 Gene

Gene Ontology (GO) - Biological Process for NPM1P20 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NPM1P20 Gene

Drugs & Compounds for NPM1P20 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for NPM1P20 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for NPM1P20 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for NPM1P20 Gene

No ASD Table

Relevant External Links for NPM1P20 Gene

GeneLoc Exon Structure for
NPM1P20
ECgene alternative splicing isoforms for
NPM1P20

Expression for NPM1P20 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NPM1P20 Gene

mRNA expression in normal human tissues for NPM1P20 Gene
mRNA expression by GTEx for NPM1P20 Gene

NURSA nuclear receptor signaling pathways regulating expression of NPM1P20 Gene:

NPM1P20
genes like me logo Genes that share expression patterns with NPM1P20: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NPM1P20 Gene

Orthologs for NPM1P20 Gene

Evolution for NPM1P20 Gene

ENSEMBL:
Gene Tree for NPM1P20 (if available)
TreeFam:
Gene Tree for NPM1P20 (if available)

No data available for Orthologs for NPM1P20 Gene

Paralogs for NPM1P20 Gene

No data available for Paralogs for NPM1P20 Gene

Variants for NPM1P20 Gene

Additional Variant Information for NPM1P20 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NPM1P20

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NPM1P20 Gene

Disorders for NPM1P20 Gene

No disorders were found for NPM1P20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NPM1P20 Gene

Publications for NPM1P20 Gene

No publications were found for NPM1P20 Gene.

Products for NPM1P20 Gene

Sources for NPM1P20 Gene

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