Free for academic non-profit institutions. Other users need a Commercial license

Aliases for NPM1P20 Gene

Subcategory (RNA class) for NPM1P20 Gene

antisense

Aliases for NPM1P20 Gene

  • Nucleophosmin 1 Pseudogene 20 2 3
  • Nucleophosmin 1 (Nucleolar Phosphoprotein B23, Numatrin) Pseudogene 20 2 3

External Ids for NPM1P20 Gene

ORGUL Members for NPM1P20 Gene

Previous GeneCards Identifiers for NPM1P20 Gene

  • GC14U900118
  • GC14M100299
  • GC14M101378
  • GC14M102308
  • GC14M082488

Summaries for NPM1P20 Gene

GeneCards Summary for NPM1P20 Gene

NPM1P20 (Nucleophosmin 1 Pseudogene 20) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for NPM1P20 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NPM1P20 Gene

Genomics for NPM1P20 Gene

GeneHancer (GH) Regulatory Elements for NPM1P20 Gene

Promoters and enhancers for NPM1P20 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J101843 Enhancer 0.9 ENCODE dbSUPER 600.7 -0.5 -486 3.4 MLLT1 RAD21 IKZF1 ZNF143 TRIM22 EED RUNX3 BCLAF1 ZNF217 SMC3 ENSG00000259161 NPM1P20 ENSG00000258919 GC14P104055 PPP2R5C
GH14J101842 Enhancer 0.4 ENCODE dbSUPER 600.7 +1.6 1611 0.2 ENSG00000259161 NPM1P20 ENSG00000256705 PPP2R5C
GH14J101874 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -33.3 -33298 6.2 SP1 ZNF687 CREM MLLT1 ZBED1 IKZF1 ZBTB33 POLR2A BACH1 IKZF2 PPP2R5C ENSG00000271780 TECPR2 WDR20 GC14P104055 NPM1P20
GH14J101851 Promoter/Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -7.7 -7728 1.3 ZNF121 ZNF18 POLR2A PPP2R5C ENSG00000271780 NPM1P20 GC14P104055
GH14J101853 Promoter/Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -10.2 -10157 1.4 POLR2A PPP2R5C WDR20 NPM1P20 GC14P104055
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NPM1P20 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NPM1P20 Gene

Genomic Locations for NPM1P20 Gene
chr14:101,842,761-101,844,130
(GRCh38/hg38)
Size:
1,370 bases
Orientation:
Minus strand
chr14:102,309,098-102,310,467
(GRCh37/hg19)
Size:
1,370 bases
Orientation:
Minus strand

Genomic View for NPM1P20 Gene

Genes around NPM1P20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NPM1P20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NPM1P20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NPM1P20 Gene

Proteins for NPM1P20 Gene

Post-translational modifications for NPM1P20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NPM1P20 Gene

Domains & Families for NPM1P20 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NPM1P20 Gene

Function for NPM1P20 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NPM1P20 Gene

Localization for NPM1P20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NPM1P20 Gene

Pathways & Interactions for NPM1P20 Gene

PathCards logo

SuperPathways for NPM1P20 Gene

No Data Available

Interacting Proteins for NPM1P20 Gene

Gene Ontology (GO) - Biological Process for NPM1P20 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NPM1P20 Gene

Drugs & Compounds for NPM1P20 Gene

No Compound Related Data Available

Transcripts for NPM1P20 Gene

mRNA/cDNA for NPM1P20 Gene

(1) Selected AceView cDNA sequences:

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for NPM1P20 Gene

No ASD Table

Relevant External Links for NPM1P20 Gene

GeneLoc Exon Structure for
NPM1P20
ECgene alternative splicing isoforms for
NPM1P20

Expression for NPM1P20 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NPM1P20 Gene

NURSA nuclear receptor signaling pathways regulating expression of NPM1P20 Gene:

NPM1P20
genes like me logo Genes that share expression patterns with NPM1P20: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NPM1P20 Gene

Orthologs for NPM1P20 Gene

No data available for Orthologs and Evolution for NPM1P20 Gene

Paralogs for NPM1P20 Gene

No data available for Paralogs for NPM1P20 Gene

Variants for NPM1P20 Gene

Additional Variant Information for NPM1P20 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NPM1P20

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NPM1P20 Gene

Disorders for NPM1P20 Gene

No disorders were found for NPM1P20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NPM1P20 Gene

Publications for NPM1P20 Gene

No publications were found for NPM1P20 Gene.

No data available for External Links for NPM1P20 Gene

Products for NPM1P20 Gene

Sources for NPM1P20 Gene

Content
Loading form....