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NPM1P19 Gene(Pseudogene)

Nucleophosmin 1 Pseudogene 19

GCID:
GC20M038977
GIFtS:
10
Genes Participants
UDN Logo

Aliases for NPM1P19 Gene

Aliases for NPM1P19 Gene

  • Nucleophosmin 1 Pseudogene 19 2 3 5
  • Nucleophosmin 1 (Nucleolar Phosphoprotein B23, Numatrin) Pseudogene 19 2 3
  • Nucleophosmin (Nucleolar Phosphoprotein B23, Numatrin) Pseudogene 3

External Ids for NPM1P19 Gene

Previous GeneCards Identifiers for NPM1P19 Gene

  • GC00U990488
  • GC20U900013
  • GC20M038244
  • GC20M038291
  • GC20M037039
  • GC20M037607
  • GC20M034343

Summaries for NPM1P19 Gene

GeneCards Summary for NPM1P19 Gene

NPM1P19 (Nucleophosmin 1 Pseudogene 19) is a Pseudogene.

Additional gene information for NPM1P19 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NPM1P19 Gene

Genomics for NPM1P19 Gene

GeneHancer (GH) Regulatory Elements for NPM1P19 Gene

Promoters and enhancers for NPM1P19 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH20J038978 Enhancer 0.2 dbSUPER 600.7 -1.4 -1368 1.8 NPM1P19 FAM83D DHX35 PIR38411
GH20J038973 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.7 +4.7 4715 0.8 ZNF600 SCRT2 SCRT1 ZNF335 PRDM6 FAM83D NPM1P19 ENSG00000277581 DHX35
GH20J038981 Enhancer 0.9 Ensembl ENCODE 0.7 -3.9 -3856 0.9 ELF3 PPARG SP5 GATAD2A SOX13 FOXA2 SAP130 TEAD1 ZNF217 FOXP1 FAM83D DHX35 NPM1P19 PIR38411
GH20J038985 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -7.5 -7526 4.5 ELF3 CEBPG TFE3 SP7 RELA HNF1A MLLT1 ZNF384 IKZF1 POLR2A DHX35 FAM83D NPM1P19 PIR38411
GH20J038969 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 +8.2 8221 1.9 PRDM1 POLR2A PRDM10 ZNF629 CREM JUND ZBTB21 FAM83D DHX35 NPM1P19 ENSG00000277581
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NPM1P19 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NPM1P19 Gene

Genomic Locations for NPM1P19 Gene
chr20:38,977,514-38,978,514
(GRCh38/hg38)
Size:
1,001 bases
Orientation:
Minus strand
chr20:37,606,354-37,607,157
(GRCh37/hg19)
Size:
804 bases
Orientation:
Minus strand

Genomic View for NPM1P19 Gene

Genes around NPM1P19 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NPM1P19 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NPM1P19 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for NPM1P19 Gene

Proteins for NPM1P19 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for NPM1P19 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NPM1P19 Gene

Domains & Families for NPM1P19 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NPM1P19 Gene

Function for NPM1P19 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for NPM1P19 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NPM1P19 Gene

Localization for NPM1P19 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NPM1P19 Gene

Pathways & Interactions for NPM1P19 Gene

GeneAnalytics - gene set analysis. Cells, Diseases, Pathways, Function and Compounds, relevant to your gene set. Powered by GeneCards
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SuperPathways for NPM1P19 Gene

No Data Available

Interacting Proteins for NPM1P19 Gene

Gene Ontology (GO) - Biological Process for NPM1P19 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NPM1P19 Gene

Drugs & Compounds for NPM1P19 Gene

Products:

  1. Drug
GeneAnalytics - gene set analysis. Cells, Diseases, Pathways, Function and Compounds, relevant to your gene set. Powered by GeneCards
No Compound Related Data Available

Transcripts for NPM1P19 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for NPM1P19 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for NPM1P19 Gene

No ASD Table

Relevant External Links for NPM1P19 Gene

GeneLoc Exon Structure for
NPM1P19
ECgene alternative splicing isoforms for
NPM1P19

Expression for NPM1P19 Gene

Products:

  1. Primer
GeneAnalytics - gene set analysis. Cells, Diseases, Pathways, Function and Compounds, relevant to your gene set. Powered by GeneCards

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NPM1P19 Gene

mRNA expression in normal human tissues for NPM1P19 Gene
mRNA expression by GTEx for NPM1P19 Gene

NURSA nuclear receptor signaling pathways regulating expression of NPM1P19 Gene:

NPM1P19
genes like me logo Genes that share expression patterns with NPM1P19: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NPM1P19 Gene

Orthologs for NPM1P19 Gene

Evolution for NPM1P19 Gene

ENSEMBL:
Gene Tree for NPM1P19 (if available)
TreeFam:
Gene Tree for NPM1P19 (if available)

No data available for Orthologs for NPM1P19 Gene

Paralogs for NPM1P19 Gene

No data available for Paralogs for NPM1P19 Gene

Variants for NPM1P19 Gene

VarElect - NGS phenotyper. Rapid prioritization of variants from NGS data powered by 100+ GeneCards sources

Additional Variant Information for NPM1P19 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NPM1P19

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NPM1P19 Gene

Disorders for NPM1P19 Gene

Additional Disease Information for NPM1P19

Genetic Association Database
(GAD)

No disorders were found for NPM1P19 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NPM1P19 Gene

Publications for NPM1P19 Gene

  1. Genome-wide search for replicable risk gene regions in alcohol and nicotine co-dependence. (PMID: 22488850) Zuo L … Luo X (American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics 2012) 45 58
  2. Genome-wide association scan for survival on dialysis in African-Americans with type 2 diabetes. (PMID: 21546767) Murea M … Freedman BI (American journal of nephrology 2011) 45 58

No data available for External Links for NPM1P19 Gene

Products for NPM1P19 Gene

Sources for NPM1P19 Gene

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