Aliases for NPM1P19 Gene

Aliases for NPM1P19 Gene

  • Nucleophosmin 1 Pseudogene 19 2 3 5
  • Nucleophosmin 1 (Nucleolar Phosphoprotein B23, Numatrin) Pseudogene 19 2 3
  • Nucleophosmin (Nucleolar Phosphoprotein B23, Numatrin) Pseudogene 3
  • NPM1P19 5

External Ids for NPM1P19 Gene

Previous GeneCards Identifiers for NPM1P19 Gene

  • GC00U990488
  • GC20U900013
  • GC20M038244
  • GC20M038291
  • GC20M037039
  • GC20M037607
  • GC20M034343

Summaries for NPM1P19 Gene

GeneCards Summary for NPM1P19 Gene

NPM1P19 (Nucleophosmin 1 Pseudogene 19) is a Pseudogene.

Additional gene information for NPM1P19 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NPM1P19 Gene

Genomics for NPM1P19 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for NPM1P19 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J038978 Enhancer 0.2 dbSUPER 600.7 -1.4 -1368 1.8 NPM1P19 piR-47132-003 FAM83D DHX35 piR-43939-021
GH20J038981 Enhancer 0.8 Ensembl ENCODE 0.7 -4.1 -4086 1.6 GATAD2A FOXA1 SOX13 FOXA2 ZNF217 TEAD1 FOXP1 SAP130 KLF9 TFAP4 FAM83D DHX35 NPM1P19 piR-43939-021
GH20J038985 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -7.7 -7725 4.1 GATAD2A ZNF629 TFE3 IKZF1 JUND RELA RXRB IRF2 IKZF2 SP1 DHX35 FAM83D NPM1P19 piR-43939-021
GH20J038997 Enhancer 1 FANTOM5 ENCODE 0.4 -19.4 -19395 1.1 SP1 IKZF1 MTA2 RELA PKNOX1 RAD21 TCF12 IKZF2 TRIM22 EED DHX35 RALGAPB FAM83D ACTR5 SNHG17 TTI1 RN7SKP173 SNORA71C NPM1P19 piR-43939-021
GH20J039004 Enhancer 0.6 Ensembl ENCODE 0.3 -26.3 -26287 1.2 NFIC NFIB KLF1 FAM83D DHX35 NPM1P19 piR-43939-021
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NPM1P19 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for NPM1P19 Gene

Genomic Locations for NPM1P19 Gene
chr20:38,977,514-38,978,514
(GRCh38/hg38)
Size:
1,001 bases
Orientation:
Minus strand
chr20:37,606,354-37,607,157
(GRCh37/hg19)
Size:
804 bases
Orientation:
Minus strand

Genomic View for NPM1P19 Gene

Genes around NPM1P19 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NPM1P19 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NPM1P19 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NPM1P19 Gene

Proteins for NPM1P19 Gene

Post-translational modifications for NPM1P19 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NPM1P19 Gene

Domains & Families for NPM1P19 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NPM1P19 Gene

Function for NPM1P19 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NPM1P19 Gene

Localization for NPM1P19 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NPM1P19 Gene

Pathways & Interactions for NPM1P19 Gene

PathCards logo

SuperPathways for NPM1P19 Gene

No Data Available

Gene Ontology (GO) - Biological Process for NPM1P19 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for NPM1P19 Gene

Drugs & Compounds for NPM1P19 Gene

No Compound Related Data Available

Transcripts for NPM1P19 Gene

mRNA/cDNA for NPM1P19 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for NPM1P19 Gene

No ASD Table

Relevant External Links for NPM1P19 Gene

GeneLoc Exon Structure for
NPM1P19

Expression for NPM1P19 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NPM1P19 Gene

genes like me logo Genes that share expression patterns with NPM1P19: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NPM1P19 Gene

Orthologs for NPM1P19 Gene

Evolution for NPM1P19 Gene

ENSEMBL:
Gene Tree for NPM1P19 (if available)
TreeFam:
Gene Tree for NPM1P19 (if available)

No data available for Orthologs for NPM1P19 Gene

Paralogs for NPM1P19 Gene

No data available for Paralogs for NPM1P19 Gene

Variants for NPM1P19 Gene

Additional Variant Information for NPM1P19 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NPM1P19

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NPM1P19 Gene

Disorders for NPM1P19 Gene

Additional Disease Information for NPM1P19

Genetic Association Database
(GAD)

No disorders were found for NPM1P19 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NPM1P19 Gene

Publications for NPM1P19 Gene

  1. Genome-wide search for replicable risk gene regions in alcohol and nicotine co-dependence. (PMID: 22488850) Zuo L … Luo X (American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics 2012) 41
  2. Genome-wide association scan for survival on dialysis in African-Americans with type 2 diabetes. (PMID: 21546767) Murea M … Freedman BI (American journal of nephrology 2011) 41

No data available for Mastermind for NPM1P19 Gene

Products for NPM1P19 Gene

Sources for NPM1P19 Gene