Aliases for NPM1P13 Gene

Aliases for NPM1P13 Gene

  • Nucleophosmin 1 Pseudogene 13 2 3 5
  • Nucleophosmin 1 (Nucleolar Phosphoprotein B23, Numatrin) Pseudogene 13 2 3
  • Nucleophosmin (Nucleolar Phosphoprotein B23, Numatrin) Pseudogene 3

External Ids for NPM1P13 Gene

Previous GeneCards Identifiers for NPM1P13 Gene

  • GC07U990148
  • GC07P018246
  • GC07P018732
  • GC07M018732
  • GC07M018761
  • GC07M018954

Summaries for NPM1P13 Gene

GeneCards Summary for NPM1P13 Gene

NPM1P13 (Nucleophosmin 1 Pseudogene 13) is a Pseudogene.

Additional gene information for NPM1P13 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NPM1P13 Gene

Genomics for NPM1P13 Gene

GeneHancer (GH) Regulatory Elements for NPM1P13 Gene

Promoters and enhancers for NPM1P13 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J018974 Enhancer 0.6 Ensembl ENCODE 0.3 -25.3 -25339 2.4 JUND FOS FOSL2 MYC STAT3 HSALNG0056444 NPM1P13 lnc-TWIST1-4 HDAC9
GH07J018958 Enhancer 0.3 Ensembl 0.4 -8.8 -8839 0.6 JUND FOS NPM1P13 HSALNG0056444 HDAC9
GH07J018961 Enhancer 0.3 Ensembl 0.4 -12.0 -12039 0.6 JUND TAF1 NPM1P13 HSALNG0056444 HDAC9
GH07J018972 Enhancer 0.3 Ensembl 0.4 -22.2 -22239 0.2 POLR2A HSALNG0056444 NPM1P13 lnc-TWIST1-4 HDAC9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NPM1P13 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NPM1P13 Gene

Genomic Locations for NPM1P13 Gene
chr7:18,948,591-18,949,862
(GRCh38/hg38)
Size:
1,272 bases
Orientation:
Minus strand
chr7:18,988,214-18,989,485
(GRCh37/hg19)
Size:
1,272 bases
Orientation:
Minus strand

Genomic View for NPM1P13 Gene

Genes around NPM1P13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NPM1P13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NPM1P13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NPM1P13 Gene

Proteins for NPM1P13 Gene

Post-translational modifications for NPM1P13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NPM1P13 Gene

Domains & Families for NPM1P13 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NPM1P13 Gene

Function for NPM1P13 Gene

Phenotypes From GWAS Catalog for NPM1P13 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NPM1P13 Gene

Localization for NPM1P13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NPM1P13 Gene

Pathways & Interactions for NPM1P13 Gene

PathCards logo

SuperPathways for NPM1P13 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for NPM1P13 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for NPM1P13 Gene

Drugs & Compounds for NPM1P13 Gene

No Compound Related Data Available

Transcripts for NPM1P13 Gene

mRNA/cDNA for NPM1P13 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for NPM1P13 Gene

No ASD Table

Relevant External Links for NPM1P13 Gene

GeneLoc Exon Structure for
NPM1P13

Expression for NPM1P13 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NPM1P13 Gene

mRNA differential expression in normal tissues according to GTEx for NPM1P13 Gene

This gene is overexpressed in Adipose - Subcutaneous (x7.0), Breast - Mammary Tissue (x5.0), and Skin - Not Sun Exposed (Suprapubic) (x4.1).
genes like me logo Genes that share expression patterns with NPM1P13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NPM1P13 Gene

Orthologs for NPM1P13 Gene

Evolution for NPM1P13 Gene

ENSEMBL:
Gene Tree for NPM1P13 (if available)
TreeFam:
Gene Tree for NPM1P13 (if available)

No data available for Orthologs for NPM1P13 Gene

Paralogs for NPM1P13 Gene

No data available for Paralogs for NPM1P13 Gene

Variants for NPM1P13 Gene

Additional Variant Information for NPM1P13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NPM1P13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NPM1P13 Gene

Disorders for NPM1P13 Gene

Additional Disease Information for NPM1P13

Genetic Association Database
(GAD)

No disorders were found for NPM1P13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NPM1P13 Gene

Publications for NPM1P13 Gene

  1. A genome-wide RNAi screen identifies multiple synthetic lethal interactions with the Ras oncogene. (PMID: 19490893) Luo J … Elledge SJ (Cell 2009) 3 54
  2. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 41 54
  3. The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier LW … Wilson RK (Nature 2003) 3 54

Products for NPM1P13 Gene

Sources for NPM1P13 Gene