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Aliases for NPAP1P3 Gene

Subcategory (RNA class) for NPAP1P3 Gene

lncRNA

Aliases for NPAP1P3 Gene

  • Nuclear Pore Associated Protein 1 Pseudogene 3 2 3 5

External Ids for NPAP1P3 Gene

ORGUL Members for NPAP1P3 Gene

Previous GeneCards Identifiers for NPAP1P3 Gene

  • GC10P089138

Summaries for NPAP1P3 Gene

GeneCards Summary for NPAP1P3 Gene

NPAP1P3 (Nuclear Pore Associated Protein 1 Pseudogene 3) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for NPAP1P3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NPAP1P3 Gene

Genomics for NPAP1P3 Gene

GeneHancer (GH) Regulatory Elements for NPAP1P3 Gene

Promoters and enhancers for NPAP1P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J086714 Enhancer 0.6 Ensembl dbSUPER 5.2 -661.4 -661396 1.4 ZNF121 CTBP1 GC10M086714 NPAP1P3 BMPR1A LDB3
GH10J086717 Enhancer 0.4 dbSUPER 5.2 -658.5 -658479 1.4 CEBPB CEBPG NPAP1P3 GC10M086714 BMPR1A LDB3
GH10J087382 Enhancer 0.7 Ensembl 0.4 +6.4 6405 1 MAFK SMARCA4 DPF2 ZNF316 MGA NFE2 HDGF NFRKB MAFG NCOR1 NUTM2D NPAP1P3 CTSLP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NPAP1P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NPAP1P3 Gene

Genomic Locations for NPAP1P3 Gene
chr10:87,376,896-87,378,481
(GRCh38/hg38)
Size:
1,586 bases
Orientation:
Plus strand
chr10:89,136,653-89,138,238
(GRCh37/hg19)
Size:
1,586 bases
Orientation:
Plus strand

Genomic View for NPAP1P3 Gene

Genes around NPAP1P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NPAP1P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NPAP1P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NPAP1P3 Gene

Proteins for NPAP1P3 Gene

Post-translational modifications for NPAP1P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NPAP1P3 Gene

Domains & Families for NPAP1P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NPAP1P3 Gene

Function for NPAP1P3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NPAP1P3 Gene

Localization for NPAP1P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NPAP1P3 Gene

Pathways & Interactions for NPAP1P3 Gene

PathCards logo

SuperPathways for NPAP1P3 Gene

No Data Available

Interacting Proteins for NPAP1P3 Gene

Gene Ontology (GO) - Biological Process for NPAP1P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NPAP1P3 Gene

Drugs & Compounds for NPAP1P3 Gene

No Compound Related Data Available

Transcripts for NPAP1P3 Gene

mRNA/cDNA for NPAP1P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NPAP1P3 Gene

No ASD Table

Relevant External Links for NPAP1P3 Gene

GeneLoc Exon Structure for
NPAP1P3
ECgene alternative splicing isoforms for
NPAP1P3

Expression for NPAP1P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NPAP1P3 Gene

mRNA differential expression in normal tissues according to GTEx for NPAP1P3 Gene

This gene is overexpressed in Testis (x11.2).

NURSA nuclear receptor signaling pathways regulating expression of NPAP1P3 Gene:

NPAP1P3
genes like me logo Genes that share expression patterns with NPAP1P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NPAP1P3 Gene

Orthologs for NPAP1P3 Gene

Evolution for NPAP1P3 Gene

ENSEMBL:
Gene Tree for NPAP1P3 (if available)
TreeFam:
Gene Tree for NPAP1P3 (if available)

No data available for Orthologs for NPAP1P3 Gene

Paralogs for NPAP1P3 Gene

No data available for Paralogs for NPAP1P3 Gene

Variants for NPAP1P3 Gene

Additional Variant Information for NPAP1P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NPAP1P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NPAP1P3 Gene

Disorders for NPAP1P3 Gene

No disorders were found for NPAP1P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NPAP1P3 Gene

Publications for NPAP1P3 Gene

No publications were found for NPAP1P3 Gene.

No data available for External Links for NPAP1P3 Gene

Products for NPAP1P3 Gene

Sources for NPAP1P3 Gene

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