Aliases for NORAD Gene

Subcategory (RNA class) for NORAD Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for NORAD Gene

  • Non-Coding RNA Activated By DNA Damage 2 3 5
  • NORAD 2 5 165
  • Long Intergenic Non-Protein Coding RNA 657 2 3
  • NONHSAG031696.2 91
  • HSALNG0129818 164
  • LINC00657 3

External Ids for NORAD Gene

Previous HGNC Symbols for NORAD Gene

  • LINC00657

Previous GeneCards Identifiers for NORAD Gene

  • GC20M036048

Summaries for NORAD Gene

GeneCards Summary for NORAD Gene

NORAD (Non-Coding RNA Activated By DNA Damage) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with NORAD include Pancreatic Cancer and Bladder Cancer.

Additional gene information for NORAD Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NORAD Gene

Genomics for NORAD Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for NORAD Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J036048 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas 600.7 +1.1 1109 5 SP1 HNRNPL GATAD2A PRDM10 REST ZNF629 TFE3 SIX5 LEF1 SOX13 ENSG00000234139 NORAD piR-39126-001 CPNE1 DSN1 RBM12 RBM39 MYL9 RPL36P4 TRPC4AP
GH20J036454 Enhancer 1.4 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 10 -404.4 -404381 2 TEAD4 PRDM10 TFE3 SP1 PBX2 ZNF341 MNT ZNF444 FOXA2 RCOR1 NDRG3 ENSG00000232406 EPB41L1 NORAD MYL9 DLGAP4 SOGA1 piR-43955 piR-57460-409
GH20J036399 Enhancer 1 Ensembl ENCODE 4.5 -349.1 -349142 1.6 GATAD2A CTCF TEAD4 TFE3 RFX1 RFX5 KDM1A JUND RXRB REST MROH8 NORAD piR-57460-409 RF00017-3571 DLGAP4 MYL9 RF00017-3566
GH20J036195 Enhancer 0.2 dbSUPER 4.9 -145.4 -145354 2.4 AAR2 CNBD2 NORAD MMP24 MMP24OS piR-43105-377 LOC100130373 ENSG00000232406 EPB41L1 RF00017-3566
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NORAD on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for NORAD Gene

Genomic Locations for NORAD Gene
chr20:36,045,299-36,051,018
(GRCh38/hg38)
Size:
5,720 bases
Orientation:
Minus strand
chr20:34,633,540-34,638,882
(GRCh37/hg19)
Size:
5,343 bases
Orientation:
Minus strand

Genomic View for NORAD Gene

Genes around NORAD on UCSC Golden Path with GeneCards custom track
NORAD in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
NORAD Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NORAD Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NORAD Gene

Proteins for NORAD Gene

No data available for DME Specific Peptides for NORAD Gene

Domains & Families for NORAD Gene

Gene Families for NORAD Gene

genes like me logo Genes that share domains with NORAD: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NORAD Gene

Function for NORAD Gene

Phenotypes From GWAS Catalog for NORAD Gene

Phenotypes for NORAD Gene

genes like me logo Genes that share phenotypes with NORAD: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NORAD Gene

Localization for NORAD Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for NORAD gene
Compartment Confidence
nucleus 2
plasma membrane 1
extracellular 1
cytoskeleton 1
mitochondrion 1
endoplasmic reticulum 1
cytosol 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NORAD Gene

Pathways & Interactions for NORAD Gene

PathCards logo

SuperPathways for NORAD Gene

No Data Available

Gene Ontology (GO) - Biological Process for NORAD Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for NORAD Gene

Drugs & Compounds for NORAD Gene

No Compound Related Data Available

Transcripts for NORAD Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for NORAD Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075CEFB_9606 lncRNA 5291 2

HGNC: 44311,

RefSeq: NR_027451,

URS0000E6DD44_9606 lncRNA 5401 1

Ensembl: ENST00000565493 (view in UCSC) ,

URS00008BF55D_9606 lncRNA 666 3

LncBook: HSALNT0266721,

LNCipedia: NORAD:6,

NONCODE: NONHSAT189610.1,

URS00008C137B_9606 lncRNA 5343 2

LNCipedia: NORAD:4,

NONCODE: NONHSAT079548.2,

URS00008C11D7_9606 lncRNA 4266 2

LNCipedia: NORAD:2,

NONCODE: NONHSAT079547.2,

NORAD in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for NORAD Gene

3 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for NORAD Gene

No ASD Table

Relevant External Links for NORAD Gene

GeneLoc Exon Structure for
NORAD

Expression for NORAD Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for NORAD

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NORAD Gene

Orthologs for NORAD Gene

Evolution for NORAD Gene

ENSEMBL:
Gene Tree for NORAD (if available)
TreeFam:
Gene Tree for NORAD (if available)

No data available for Orthologs for NORAD Gene

Paralogs for NORAD Gene

No data available for Paralogs for NORAD Gene

Variants for NORAD Gene

Additional dbSNP identifiers (rs#s) for NORAD Gene

Structural Variations from Database of Genomic Variants (DGV) for NORAD Gene

Variant ID Type Subtype PubMed ID
nsv1066673 CNV loss 25217958
nsv833964 CNV loss 17160897
nsv964394 CNV duplication 23825009

Additional Variant Information for NORAD Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NORAD

SNP Genotyping and Copy Number Assay Products

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for NORAD Gene

Disorders for NORAD Gene

MalaCards: The human disease database

(6) MalaCards diseases for NORAD Gene - From: LncRNADisease and DISEASES

Disorder Aliases PubMed IDs
pancreatic cancer
  • pancreatic carcinoma
bladder cancer
  • bladder cancer, somatic
esophageal cancer
  • esophageal cancer, somatic
breast cancer
  • breast lobular carcinoma
hepatocellular carcinoma
  • hcc
- elite association - COSMIC cancer census association via MalaCards
Search NORAD in MalaCards View complete list of genes associated with diseases
genes like me logo Genes that share disorders with NORAD: view

No data available for UniProtKB/Swiss-Prot and Genatlas for NORAD Gene

Publications for NORAD Gene

  1. Noncoding RNA NORAD Regulates Genomic Stability by Sequestering PUMILIO Proteins. (PMID: 26724866) Lee S … Mendell JT (Cell 2016) 2 3
  2. A conserved abundant cytoplasmic long noncoding RNA modulates repression by Pumilio proteins in human cells. (PMID: 27406171) Tichon A … Ulitsky I (Nature communications 2016) 2 3
  3. The long noncoding RNA NORAD promotes the growth of gastric cancer cells by sponging miR-608. (PMID: 30453063) Miao Z … Tian L (Gene 2019) 3
  4. Association between LINC00657 and miR-106a serum expression levels and susceptibility to colorectal cancer, adenomatous polyposis, and ulcerative colitis in Egyptian population. (PMID: 30927333) Shaker OG … AbdelHafez MN (IUBMB life 2019) 3
  5. Long noncoding RNA NORAD regulates cancer cell proliferation and migration in human osteosarcoma by endogenously competing with miR-199a-3p. (PMID: 31169973) Wang X … Sun J (IUBMB life 2019) 3

Products for NORAD Gene

Sources for NORAD Gene