Aliases for NOP56P3 Gene

Aliases for NOP56P3 Gene

  • NOP56 Ribonucleoprotein Pseudogene 3 2 3 5

External Ids for NOP56P3 Gene

Previous GeneCards Identifiers for NOP56P3 Gene

  • GC00U935866

Summaries for NOP56P3 Gene

GeneCards Summary for NOP56P3 Gene

NOP56P3 (NOP56 Ribonucleoprotein Pseudogene 3) is a Pseudogene.

Additional gene information for NOP56P3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NOP56P3 Gene

Genomics for NOP56P3 Gene

GeneHancer (GH) Regulatory Elements for NOP56P3 Gene

Promoters and enhancers for NOP56P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J079554 Enhancer 1 Ensembl ENCODE 750.6 -0.9 -906 6.4 CTCF LCORL FOXA1 ATF1 NR2F6 ZNF217 CREB1 MIXL1 HLF RAD21 NOP56P3 lnc-SYT1-6 PAWR ENSG00000258044 ENSG00000257894 piR-32559-097 lnc-PAWR-7
GH12J079931 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 9.8 +375.4 375442 6 SIN3A ZBTB40 CTCF ZBTB6 SMARCE1 POLR2A MYC NFYC ELF1 L3MBTL2 PPP1R12A PPP1R12A-AS1 lnc-OTOGL-1 NOP56P3 RPL7P38 RF00994-252
GH12J079545 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -10.4 -10381 5.8 SIN3A CTCF GATA3 LCORL MLX RBPJ POLR2A TCF7L2 NR2F6 ATF1 PAWR ENSG00000258044 ENSG00000257894 piR-32559-097 ENSG00000257474 NOP56P3 lnc-SYT1-6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NOP56P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NOP56P3 Gene

Genomic Locations for NOP56P3 Gene
chr12:79,558,782-79,559,166
(GRCh38/hg38)
Size:
385 bases
Orientation:
Plus strand

Genomic View for NOP56P3 Gene

Genes around NOP56P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NOP56P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NOP56P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NOP56P3 Gene

Proteins for NOP56P3 Gene

Post-translational modifications for NOP56P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NOP56P3 Gene

Domains & Families for NOP56P3 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NOP56P3 Gene

Function for NOP56P3 Gene

Phenotypes From GWAS Catalog for NOP56P3 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NOP56P3 Gene

Localization for NOP56P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NOP56P3 Gene

Pathways & Interactions for NOP56P3 Gene

PathCards logo

SuperPathways for NOP56P3 Gene

No Data Available

Gene Ontology (GO) - Biological Process for NOP56P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NOP56P3 Gene

Drugs & Compounds for NOP56P3 Gene

No Compound Related Data Available

Transcripts for NOP56P3 Gene

mRNA/cDNA for NOP56P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NOP56P3 Gene

No ASD Table

Relevant External Links for NOP56P3 Gene

GeneLoc Exon Structure for
NOP56P3
ECgene alternative splicing isoforms for
NOP56P3

Expression for NOP56P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NOP56P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of NOP56P3 Gene:

NOP56P3
genes like me logo Genes that share expression patterns with NOP56P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NOP56P3 Gene

Orthologs for NOP56P3 Gene

Evolution for NOP56P3 Gene

ENSEMBL:
Gene Tree for NOP56P3 (if available)
TreeFam:
Gene Tree for NOP56P3 (if available)

No data available for Orthologs for NOP56P3 Gene

Paralogs for NOP56P3 Gene

No data available for Paralogs for NOP56P3 Gene

Variants for NOP56P3 Gene

Additional Variant Information for NOP56P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NOP56P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NOP56P3 Gene

Disorders for NOP56P3 Gene

No disorders were found for NOP56P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NOP56P3 Gene

Publications for NOP56P3 Gene

No publications were found for NOP56P3 Gene.

Products for NOP56P3 Gene

Sources for NOP56P3 Gene