Aliases for NOP53-AS1 Gene

Data sources for NOP53-AS1 Gene:

Subcategory (RNA class) for NOP53-AS1 Gene

lncRNA

Aliases for NOP53-AS1 Gene

External Ids for NOP53-AS1 Gene

Previous HGNC Symbols for NOP53-AS1 Gene

  • GLTSCR2-AS1

Summaries for NOP53-AS1 Gene

GeneCards Summary for NOP53-AS1 Gene

NOP53-AS1 (NOP53 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for NOP53-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NOP53-AS1 Gene

Genomics for NOP53-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for NOP53-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NOP53-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for NOP53-AS1 Gene

Latest Assembly
chr19:47,757,035-47,768,840
(GRCh38/hg38)
Size:
11,806 bases
Orientation:
Minus strand

Previous Assembly
chr19:48,260,293-48,272,097
(GRCh37/hg19 by Entrez Gene)
Size:
11,805 bases
Orientation:
Minus strand

chr19:48,260,293-48,272,097
(GRCh37/hg19 by Ensembl)
Size:
11,805 bases
Orientation:
Minus strand

Genomic View for NOP53-AS1 Gene

Genes around NOP53-AS1 on UCSC Golden Path with GeneCards custom track
NOP53-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
NOP53-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NOP53-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NOP53-AS1 Gene

Proteins for NOP53-AS1 Gene

Post-translational modifications for NOP53-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NOP53-AS1 Gene

Domains & Families for NOP53-AS1 Gene

Gene Families for NOP53-AS1 Gene

genes like me logo Genes that share domains with NOP53-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NOP53-AS1 Gene

Function for NOP53-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NOP53-AS1 Gene

Localization for NOP53-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NOP53-AS1 Gene

Pathways & Interactions for NOP53-AS1 Gene

PathCards logo

SuperPathways for NOP53-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for NOP53-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for NOP53-AS1 Gene

Drugs & Compounds for NOP53-AS1 Gene

No Compound Related Data Available

Transcripts for NOP53-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for NOP53-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000036E956_9606 lncRNA 543 4

RefSeq: NR_132382,

Ensembl: ENST00000602048 (view in UCSC) ,

LNCipedia: NOP53-AS1:3,

NONCODE: NONHSAT066992.2,

URS0001BEEE97_9606 lncRNA 2120 1

LncBook: HSALNT0261028,

NOP53-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for NOP53-AS1 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for NOP53-AS1 Gene

No ASD Table

Relevant External Links for NOP53-AS1 Gene

GeneLoc Exon Structure for
NOP53-AS1

Expression for NOP53-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NOP53-AS1 Gene

Orthologs for NOP53-AS1 Gene

Evolution for NOP53-AS1 Gene

ENSEMBL:
Gene Tree for NOP53-AS1 (if available)
TreeFam:
Gene Tree for NOP53-AS1 (if available)

No data available for Orthologs for NOP53-AS1 Gene

Paralogs for NOP53-AS1 Gene

No data available for Paralogs for NOP53-AS1 Gene

Variants for NOP53-AS1 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for NOP53-AS1 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for NOP53-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NOP53-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NOP53-AS1 Gene

Disorders for NOP53-AS1 Gene

Additional Disease Information for NOP53-AS1

No disorders were found for NOP53-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NOP53-AS1 Gene

Publications for NOP53-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3

Products for NOP53-AS1 Gene

Sources for NOP53-AS1 Gene