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Aliases for NONHSAG046175.2 Gene
Data sources for NONHSAG046175.2 Gene:
Subcategory (RNA class) for NONHSAG046175.2 Gene
lncRNA
Previous GeneCards Identifiers for NONHSAG046175.2 Gene
- GC06M028988
- GC06M029094
- GC06M029190
No data available for External Ids for NONHSAG046175.2 Gene
Summaries for NONHSAG046175.2 Gene
GeneCards Summary for NONHSAG046175.2 Gene
NONHSAG046175.2 is an RNA Gene, and is affiliated with the lncRNA class.
Rfam classification for NONHSAG046175.2 Gene
-
Metazoan signal recognition particle RNA
Additional gene information for NONHSAG046175.2 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for NONHSAG046175.2 Gene
Genomics for NONHSAG046175.2 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for NONHSAG046175.2 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH06J028927 | Enhancer | 0.7 | Ensembl ENCODE | 250.7 | -0.8 | -763 | 0.9 | ZEB2 ZBTB48 ZBTB33 L3MBTL2 JUNB GTF2F1 RFX1 PKNOX1 CBFA2T3 | NONHSAG046175.2 RF00017-5394 HCG14 LINC01556 ZNF602P ENSG00000230521 ZNF311 TRIM27 lnc-OR2J1-13 RF00017-5393 | |
| GH06J028929 | Enhancer | 0.7 | Ensembl | 0.7 | -2.8 | -2756 | 1.3 | TBP ZNF513 ZNF433 ZNF189 ZBTB33 ZNF547 ZNF664 ZNF530 ZNF19 ZBTB21 | ZSCAN12 ZKSCAN8 ZKSCAN3 ZSCAN9 ZNF311 ZKSCAN4 ZSCAN23 ENSG00000230521 TRIM27 HLA-F-AS1 | |
| GH06J028934 | Enhancer | 0.7 | Ensembl dbSUPER | 0.4 | -7.4 | -7431 | 1.8 | ELF1 ZEB2 ADNP FOXK2 ZBTB33 TAF7 MLLT1 HDGF ZSCAN29 ZBTB2 | HSALNG0049020 lnc-OR2J1-13 TRIM27 HCG14 NONHSAG046175.2 ZNF311 RF00017-5393 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around NONHSAG046175.2 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for NONHSAG046175.2 Gene
Latest Assembly
- chr6:28,926,990-28,927,270
- (GRCh38/hg38)
- Size:
- 281 bases
- Orientation:
- Minus strand
Genomic View for NONHSAG046175.2 Gene
Genes around NONHSAG046175.2 on UCSC Golden Path with GeneCards custom track
NONHSAG046175.2 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
NONHSAG046175.2 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
No data available for Cytogenetic band and RefSeq DNA sequence for NONHSAG046175.2 Gene
Proteins for NONHSAG046175.2 Gene
Post-translational modifications for NONHSAG046175.2 Gene
No Post-translational modifications
No data available for DME Specific Peptides for NONHSAG046175.2 Gene
Domains & Families for NONHSAG046175.2 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NONHSAG046175.2 Gene
Function for NONHSAG046175.2 Gene
Phenotypes From GWAS Catalog for NONHSAG046175.2 Gene
CRISPR products for research
Inhibitory RNAs for research
Clone products for research
Cell Lines for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NONHSAG046175.2 Gene
Localization for NONHSAG046175.2 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NONHSAG046175.2 Gene
Transcripts for NONHSAG046175.2 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for NONHSAG046175.2 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS00008C3ADF_9606 | lncRNA | 281 | 1 |
NONCODE: NONHSAT118227.2, |
| URS00008C3B63_9606 | lncRNA | 281 | 1 |
NONCODE: NONHSAT117559.2, |
NONHSAG046175.2 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
CRISPR products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for NONHSAG046175.2 Gene
- GeneLoc Exon Structure for
- NONHSAG046175.2
No data available for mRNA/cDNA for NONHSAG046175.2 Gene
Expression for NONHSAG046175.2 Gene
No Expression Related Data Available
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NONHSAG046175.2 Gene
Orthologs for NONHSAG046175.2 Gene
No data available for Orthologs and Evolution for NONHSAG046175.2 Gene
Paralogs for NONHSAG046175.2 Gene
No data available for Paralogs for NONHSAG046175.2 Gene
Variants for NONHSAG046175.2 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for NONHSAG046175.2 Gene
Disorders for NONHSAG046175.2 Gene
No disorders were found for NONHSAG046175.2 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NONHSAG046175.2 Gene
Publications for NONHSAG046175.2 Gene
No publications were found for NONHSAG046175.2 Gene.
No data available for Mastermind for NONHSAG046175.2 Gene
Products for NONHSAG046175.2 Gene
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- Lentiviral ORF Clones
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Sources for NONHSAG046175.2 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB