NONHSAG022880.2 Gene (RNA Gene)

 

GC17P078174
GIFtS:
4
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Aliases for NONHSAG022880.2 Gene

Data sources for NONHSAG022880.2 Gene:

Subcategory (RNA class) for NONHSAG022880.2 Gene

lncRNA

Aliases for NONHSAG022880.2 Gene

No data available for External Ids for NONHSAG022880.2 Gene

Summaries for NONHSAG022880.2 Gene

GeneCards Summary for NONHSAG022880.2 Gene

NONHSAG022880.2 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for NONHSAG022880.2 Gene


  • Search for NONHSAG022880.2 at DataMed
  • Search for NONHSAG022880.2 at HumanCyc

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NONHSAG022880.2 Gene

Genomics for NONHSAG022880.2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for NONHSAG022880.2 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH17J078170 Promoter/Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 250.7 -0.1 -75 6.4 MXD4 MNT MBD2 POLR2A CTCF BHLHE40 ELF1 NONO ZIC2 REST LOC107985050 NONHSAG022880.2 AFMID C17orf99 SYNGR2 TK1 TMC6 PGS1 SOCS3 piR-35723-002
GH17J078183 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +12.0 11978 5.1 CHD2 TBP MXD4 SP1 CEBPA FOXA1 MNT DEK IKZF1 SMAD5 AFMID TK1 HSALNG0119015 NONHSAG022881.2 BIRC5 SYNGR2 TMEM235 NONHSAG022880.2 LOC107985050
GH17J078178 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 +5.5 5528 2.8 CEBPB NR2F1 POLR2A FOS NR2F2 ZNF600 C17orf99 AFMID SYNGR2 LOC107985050 TK1 NONHSAG022880.2
GH17J078177 Enhancer 0.3 Ensembl 0.7 +3.4 3428 0.2 SUPT5H ZBTB33 C17orf99 TK1 LOC107985050 NONHSAG022880.2 AFMID SYNGR2
GH17J078182 Enhancer 0.3 dbSUPER 0.4 +8.4 8422 0.4 ZNF600 SYNGR2 AFMID TK1 NONHSAG022880.2 LOC107985050
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NONHSAG022880.2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for NONHSAG022880.2 Gene

Latest Assembly
chr17:78,174,273-78,184,995
(GRCh38/hg38)
Size:
10,723 bases
Orientation:
Plus strand

Genomic View for NONHSAG022880.2 Gene

Genes around NONHSAG022880.2 on UCSC Golden Path with GeneCards custom track
NONHSAG022880.2 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

NONHSAG022880.2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NONHSAG022880.2 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for NONHSAG022880.2 Gene

Proteins for NONHSAG022880.2 Gene

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  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for NONHSAG022880.2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NONHSAG022880.2 Gene

Domains & Families for NONHSAG022880.2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NONHSAG022880.2 Gene

Function for NONHSAG022880.2 Gene

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  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NONHSAG022880.2 Gene

Localization for NONHSAG022880.2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NONHSAG022880.2 Gene

Pathways & Interactions for NONHSAG022880.2 Gene

PathCards logo

SuperPathways for NONHSAG022880.2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for NONHSAG022880.2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for NONHSAG022880.2 Gene

Drugs & Compounds for NONHSAG022880.2 Gene

Products:

  1. Drug products for research
No Compound Related Data Available

Transcripts for NONHSAG022880.2 Gene

Products:

  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research

Non-coding RNA (ncRNA) Transcripts from RNAcentral for NONHSAG022880.2 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00008B38FF_9606 lncRNA 1834 1

NONCODE: NONHSAT056203.2,

URS00009C3A8E_9606 lncRNA 1670 1

NONCODE: NONHSAT175679.1,

NONHSAG022880.2 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for NONHSAG022880.2 Gene

No ASD Table

Relevant External Links for NONHSAG022880.2 Gene

GeneLoc Exon Structure for
NONHSAG022880.2

No data available for mRNA/cDNA for NONHSAG022880.2 Gene

Expression for NONHSAG022880.2 Gene

Products:

  1. Primer products for research
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NONHSAG022880.2 Gene

Orthologs for NONHSAG022880.2 Gene

No data available for Orthologs and Evolution for NONHSAG022880.2 Gene

Paralogs for NONHSAG022880.2 Gene

No data available for Paralogs for NONHSAG022880.2 Gene

Variants for NONHSAG022880.2 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for NONHSAG022880.2 Gene

Disorders for NONHSAG022880.2 Gene

No disorders were found for NONHSAG022880.2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NONHSAG022880.2 Gene

Publications for NONHSAG022880.2 Gene

No publications were found for NONHSAG022880.2 Gene.

No data available for Mastermind for NONHSAG022880.2 Gene

Products for NONHSAG022880.2 Gene

Sources for NONHSAG022880.2 Gene