Aliases for NONHSAG005788.2 Gene

Subcategory (RNA class) for NONHSAG005788.2 Gene

lncRNA

Number of RNA Genes sources:

1 / 17

Aliases for NONHSAG005788.2 Gene

  • NONHSAG005788.2 91

No data available for External Ids for NONHSAG005788.2 Gene

Summaries for NONHSAG005788.2 Gene

GeneCards Summary for NONHSAG005788.2 Gene

NONHSAG005788.2 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for NONHSAG005788.2 Gene


  • Search for NONHSAG005788.2 at DataMed
  • Search for NONHSAG005788.2 at HumanCyc

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NONHSAG005788.2 Gene

Genomics for NONHSAG005788.2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for NONHSAG005788.2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J046786 Promoter 0.8 Ensembl 600.7 -1.9 -1944 2.6 GABPA PKNOX1 RAD21 POLR2A ZSCAN29 ZBTB40 ZBTB11 ZBTB5 ZBTB26 EP400 BMS1P1 GLUD1P2 NONHSAG005788.2 lnc-GPRIN2-4 lnc-PTPN20-1 piR-39567-001 piR-43346-001 PTPN20 SYT15
GH10J046783 Enhancer 0.2 Ensembl 600.7 +1.1 1056 0.2 NONHSAG005788.2 piR-39567-001 GLUD1P2 lnc-GPRIN2-4 DUSP8P2 PTPN20 SYT15
GH10J046776 Promoter 0.3 Ensembl 0.4 +8.1 8056 0.2 DUSP8P2 ENSG00000215097 GLUD1P2 NONHSAG005788.2 lnc-GPRIN2-4 PTPN20 SYT15
GH10J046780 Enhancer 0.2 Ensembl 0.7 +3.5 3468 3.8 NONHSAG005788.2 DUSP8P2 GLUD1P2 lnc-GPRIN2-4 PTPN20 SYT15
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NONHSAG005788.2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for NONHSAG005788.2 Gene

Genomic Locations for NONHSAG005788.2 Gene
chr10:46,781,283-46,784,957
(GRCh38/hg38)
Size:
3,675 bases
Orientation:
Minus strand

Genomic View for NONHSAG005788.2 Gene

Genes around NONHSAG005788.2 on UCSC Golden Path with GeneCards custom track
NONHSAG005788.2 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

NONHSAG005788.2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NONHSAG005788.2 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for NONHSAG005788.2 Gene

Proteins for NONHSAG005788.2 Gene

Post-translational modifications for NONHSAG005788.2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NONHSAG005788.2 Gene

Domains & Families for NONHSAG005788.2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NONHSAG005788.2 Gene

Function for NONHSAG005788.2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NONHSAG005788.2 Gene

Localization for NONHSAG005788.2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NONHSAG005788.2 Gene

Pathways & Interactions for NONHSAG005788.2 Gene

PathCards logo

SuperPathways for NONHSAG005788.2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for NONHSAG005788.2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for NONHSAG005788.2 Gene

Drugs & Compounds for NONHSAG005788.2 Gene

No Compound Related Data Available

Transcripts for NONHSAG005788.2 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for NONHSAG005788.2 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00009B737B_9606 lncRNA 3675 1

NONCODE: NONHSAT013132.2,

NONHSAG005788.2 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for NONHSAG005788.2 Gene

No ASD Table

Relevant External Links for NONHSAG005788.2 Gene

GeneLoc Exon Structure for
NONHSAG005788.2

No data available for mRNA/cDNA for NONHSAG005788.2 Gene

Expression for NONHSAG005788.2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NONHSAG005788.2 Gene

Orthologs for NONHSAG005788.2 Gene

No data available for Orthologs and Evolution for NONHSAG005788.2 Gene

Paralogs for NONHSAG005788.2 Gene

No data available for Paralogs for NONHSAG005788.2 Gene

Variants for NONHSAG005788.2 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for NONHSAG005788.2 Gene

Disorders for NONHSAG005788.2 Gene

No disorders were found for NONHSAG005788.2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NONHSAG005788.2 Gene

Publications for NONHSAG005788.2 Gene

No publications were found for NONHSAG005788.2 Gene.

No data available for Mastermind for NONHSAG005788.2 Gene

Products for NONHSAG005788.2 Gene

Sources for NONHSAG005788.2 Gene