Aliases for NONHSAG001562.2 Gene

Data sources for NONHSAG001562.2 Gene:

RNA type for NONHSAG001562.2 Gene

lncRNA

Aliases for NONHSAG001562.2 Gene

No data available for External Ids for NONHSAG001562.2 Gene

Summaries for NONHSAG001562.2 Gene

GeneCards Summary for NONHSAG001562.2 Gene

NONHSAG001562.2 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for NONHSAG001562.2 Gene



  • Search for NONHSAG001562.2 at DataMed
  • Search for NONHSAG001562.2 at HumanCyc

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NONHSAG001562.2 Gene

Genomics for NONHSAG001562.2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for NONHSAG001562.2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J055066 Enhancer 0.4 Ensembl 250.7 +1.7 1703 0.8 RBM22 POLR2A SUPT5H POLR2B NONHSAG001562.2 lnc-DHCR24-2 USP24 HSALNG0003818 PCSK9
GH01J055038 Promoter/Enhancer 2.1 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.3 -25.2 -25236 3.9 IKZF1 MYC ZNF592 KLF9 BRCA1 POLR2A YY1 MXD4 CEBPB KLF11 PCSK9 TMEM61 NONHSAG001562.2 USP24
GH01J055061 Enhancer 0.9 Ensembl ENCODE 0.7 -2.1 -2129 5.3 CTCF FOXA2 RXRA RBM22 BHLHE40 JUND SUPT5H HNF4A FOXA1 ZNF768 USP24 NONHSAG001562.2 PCSK9
GH01J055054 Enhancer 0.9 Ensembl ENCODE 0.4 -11.3 -11300 3.6 ZNF10 ATF3 YY1 CEBPB FOXA2 RXRA SMAD4 RARA ZBTB33 THRB PCSK9 USP24 NONHSAG001562.2
GH01J055060 Enhancer 0.3 ENCODE 0.7 -4.8 -4845 0 BHLHE40 PAF1 NONHSAG001562.2 PCSK9 USP24
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NONHSAG001562.2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for NONHSAG001562.2 Gene

Latest Assembly
chr1:55,065,698-55,069,258
(GRCh38/hg38)
Size:
3,561 bases
Orientation:
Plus strand

Genomic View for NONHSAG001562.2 Gene

Genes around NONHSAG001562.2 on UCSC Golden Path with GeneCards custom track
NONHSAG001562.2 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

NONHSAG001562.2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NONHSAG001562.2 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for NONHSAG001562.2 Gene

Proteins for NONHSAG001562.2 Gene

Post-translational modifications for NONHSAG001562.2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NONHSAG001562.2 Gene

Domains & Families for NONHSAG001562.2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NONHSAG001562.2 Gene

Function for NONHSAG001562.2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NONHSAG001562.2 Gene

Localization for NONHSAG001562.2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NONHSAG001562.2 Gene

Pathways & Interactions for NONHSAG001562.2 Gene

PathCards logo

SuperPathways for NONHSAG001562.2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for NONHSAG001562.2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for NONHSAG001562.2 Gene

Drugs & Compounds for NONHSAG001562.2 Gene

No Compound Related Data Available

Transcripts for NONHSAG001562.2 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for NONHSAG001562.2 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00008BCBBE_9606 lncRNA 3561 2

LncBook: HSALNT0007112,

NONCODE: NONHSAT003403.2,

NONHSAG001562.2 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for NONHSAG001562.2 Gene

No ASD Table

Relevant External Links for NONHSAG001562.2 Gene

GeneLoc Exon Structure for
NONHSAG001562.2

No data available for mRNA/cDNA for NONHSAG001562.2 Gene

Expression for NONHSAG001562.2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NONHSAG001562.2 Gene

Orthologs for NONHSAG001562.2 Gene

No data available for Orthologs and Evolution for NONHSAG001562.2 Gene

Paralogs for NONHSAG001562.2 Gene

No data available for Paralogs for NONHSAG001562.2 Gene

Variants for NONHSAG001562.2 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for NONHSAG001562.2 Gene

Disorders for NONHSAG001562.2 Gene

No disorders were found for NONHSAG001562.2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NONHSAG001562.2 Gene

Publications for NONHSAG001562.2 Gene

No publications were found for NONHSAG001562.2 Gene.

No data available for Mastermind for NONHSAG001562.2 Gene

Products for NONHSAG001562.2 Gene

Sources for NONHSAG001562.2 Gene