Aliases for NOC2LP1 Gene

Aliases for NOC2LP1 Gene

  • NOC2 Like Nucleolar Associated Transcriptional Repressor Pseudogene 1 2 3 5
  • NOC2-Like Nucleolar Associated Transcriptional Repressor Pseudogene 3
  • Nucleolar Complex Associated 2 Homolog Pseudogene 3
  • NOC2LP1 5

External Ids for NOC2LP1 Gene

Summaries for NOC2LP1 Gene

GeneCards Summary for NOC2LP1 Gene

NOC2LP1 (NOC2 Like Nucleolar Associated Transcriptional Repressor Pseudogene 1) is a Pseudogene.

Additional gene information for NOC2LP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NOC2LP1 Gene

Genomics for NOC2LP1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for NOC2LP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J130229 Promoter 1 Ensembl 250.7 +0.1 137 1 NONO ZNF217 ELF1 CTBP1 SIN3B HCFC1 RUNX1 ZNF316 SIN3A CBX1 NOC2LP1 piR-32990 TUBA3E IMP4
GH02J130180 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 5.2 -47.0 -46963 5.2 SP1 ZNF207 NCOR1 MYC IKZF1 ZNF592 POLR2A BRCA1 NFIC ZIC2 MZT2B SMPD4 lnc-MZT2B-5 lnc-TUBA3E-1 TUBA3E NOC2LP1 RAB6C-AS1
GH02J130231 Enhancer 0.2 Ensembl 0.7 +2.2 2238 0.4 HSALNG0018782 piR-32990 NOC2LP1 TUBA3E IMP4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NOC2LP1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for NOC2LP1 Gene

Latest Assembly
chr2:130,229,363-130,232,106
(GRCh38/hg38)
Size:
2,744 bases
Orientation:
Plus strand

Previous Assembly
chr2:130,986,936-130,989,659
(GRCh37/hg19 by Entrez Gene)
Size:
2,724 bases
Orientation:
Plus strand

chr2:130,986,949-130,989,679
(GRCh37/hg19 by Ensembl)
Size:
2,731 bases
Orientation:
Plus strand

Genomic View for NOC2LP1 Gene

Genes around NOC2LP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NOC2LP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NOC2LP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NOC2LP1 Gene

Proteins for NOC2LP1 Gene

Post-translational modifications for NOC2LP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NOC2LP1 Gene

Domains & Families for NOC2LP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NOC2LP1 Gene

Function for NOC2LP1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NOC2LP1 Gene

Localization for NOC2LP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NOC2LP1 Gene

Pathways & Interactions for NOC2LP1 Gene

PathCards logo

SuperPathways for NOC2LP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for NOC2LP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for NOC2LP1 Gene

Drugs & Compounds for NOC2LP1 Gene

No Compound Related Data Available

Transcripts for NOC2LP1 Gene

mRNA/cDNA for NOC2LP1 Gene

1 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NOC2LP1 Gene

No ASD Table

Relevant External Links for NOC2LP1 Gene

GeneLoc Exon Structure for
NOC2LP1

Expression for NOC2LP1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NOC2LP1 Gene

Orthologs for NOC2LP1 Gene

Evolution for NOC2LP1 Gene

ENSEMBL:
Gene Tree for NOC2LP1 (if available)
TreeFam:
Gene Tree for NOC2LP1 (if available)
Alliance of Genome Resources:
Additional Orthologs for NOC2LP1

No data available for Orthologs for NOC2LP1 Gene

Paralogs for NOC2LP1 Gene

No data available for Paralogs for NOC2LP1 Gene

Variants for NOC2LP1 Gene

Additional Variant Information for NOC2LP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NOC2LP1
Leiden Open Variation Database (LOVD)
NOC2LP1

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NOC2LP1 Gene

Disorders for NOC2LP1 Gene

Additional Disease Information for NOC2LP1

No disorders were found for NOC2LP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NOC2LP1 Gene

Publications for NOC2LP1 Gene

No publications were found for NOC2LP1 Gene.

No data available for Mastermind for NOC2LP1 Gene

Products for NOC2LP1 Gene

Sources for NOC2LP1 Gene