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Aliases for NMTRP-TGG1-1 Gene

Subcategory (RNA class) for NMTRP-TGG1-1 Gene

tRNA

Quality Score for this RNA gene is

13

Aliases for NMTRP-TGG1-1 Gene

  • Nuclear-Encoded Mitochondrial TRNA-Pro (TGG) 1-1 2 3
  • Nuclear-Encoded Mitochondrial Transfer RNA-Pro (TGG) 1-1 2 3
  • Transfer RNA Proline 23 (Anticodon UGG) Pseudogene 2 3
  • Nmt-TRNA-Pro-TGG-1-1 3
  • TRNAP23P 3

External Ids for NMTRP-TGG1-1 Gene

ORGUL Members for NMTRP-TGG1-1 Gene

Previous HGNC Symbols for NMTRP-TGG1-1 Gene

  • TRNAP23P

Summaries for NMTRP-TGG1-1 Gene

GeneCards Summary for NMTRP-TGG1-1 Gene

NMTRP-TGG1-1 (Nuclear-Encoded Mitochondrial TRNA-Pro (TGG) 1-1) is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for NMTRP-TGG1-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NMTRP-TGG1-1 Gene

Genomics for NMTRP-TGG1-1 Gene

GeneHancer (GH) Regulatory Elements for NMTRP-TGG1-1 Gene

Promoters and enhancers for NMTRP-TGG1-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J237941 Enhancer 0.2 Ensembl 600.7 -1.3 -1261 0.6 MTND2P27 NMTRP-TGG1-1 ENSG00000283174 GC01P237944 GC01P237943 GC01P237941 ZP4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NMTRP-TGG1-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NMTRP-TGG1-1 Gene

Genomic Locations for NMTRP-TGG1-1 Gene
chr1:237,942,562-237,942,633
(GRCh38/hg38)
Size:
72 bases
Orientation:
Plus strand
chr1:238,105,862-238,105,933
(GRCh37/hg19)
Size:
72 bases
Orientation:
Plus strand

Genomic View for NMTRP-TGG1-1 Gene

Genes around NMTRP-TGG1-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NMTRP-TGG1-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NMTRP-TGG1-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NMTRP-TGG1-1 Gene

Proteins for NMTRP-TGG1-1 Gene

Post-translational modifications for NMTRP-TGG1-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NMTRP-TGG1-1 Gene

Domains & Families for NMTRP-TGG1-1 Gene

Gene Families for NMTRP-TGG1-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with NMTRP-TGG1-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NMTRP-TGG1-1 Gene

Function for NMTRP-TGG1-1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NMTRP-TGG1-1 Gene

Localization for NMTRP-TGG1-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NMTRP-TGG1-1 Gene

Pathways & Interactions for NMTRP-TGG1-1 Gene

PathCards logo

SuperPathways for NMTRP-TGG1-1 Gene

No Data Available

Interacting Proteins for NMTRP-TGG1-1 Gene

Gene Ontology (GO) - Biological Process for NMTRP-TGG1-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NMTRP-TGG1-1 Gene

Drugs & Compounds for NMTRP-TGG1-1 Gene

No Compound Related Data Available

Transcripts for NMTRP-TGG1-1 Gene

mRNA/cDNA for NMTRP-TGG1-1 Gene

(1) RNA Central transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for NMTRP-TGG1-1 Gene

No ASD Table

Relevant External Links for NMTRP-TGG1-1 Gene

GeneLoc Exon Structure for
NMTRP-TGG1-1
ECgene alternative splicing isoforms for
NMTRP-TGG1-1

Expression for NMTRP-TGG1-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NMTRP-TGG1-1 Gene

Orthologs for NMTRP-TGG1-1 Gene

No data available for Orthologs and Evolution for NMTRP-TGG1-1 Gene

Paralogs for NMTRP-TGG1-1 Gene

No data available for Paralogs for NMTRP-TGG1-1 Gene

Variants for NMTRP-TGG1-1 Gene

Additional Variant Information for NMTRP-TGG1-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NMTRP-TGG1-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NMTRP-TGG1-1 Gene

Disorders for NMTRP-TGG1-1 Gene

No disorders were found for NMTRP-TGG1-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NMTRP-TGG1-1 Gene

Publications for NMTRP-TGG1-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 58

Products for NMTRP-TGG1-1 Gene

Sources for NMTRP-TGG1-1 Gene

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