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Aliases for NMTRL-TAA5-1 Gene

Subcategory (RNA class) for NMTRL-TAA5-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for NMTRL-TAA5-1 Gene

  • Nuclear-Encoded Mitochondrial Transfer RNA-Leu (TAA) 5-1 2 3
  • Transfer RNA Leucine 42 (Anticodon UAA) Pseudogene 2 3
  • Nmt-TRNA-Leu-TAA-5-1 3
  • TRNAL42P 3

External Ids for NMTRL-TAA5-1 Gene

ORGUL Members for NMTRL-TAA5-1 Gene

Previous HGNC Symbols for NMTRL-TAA5-1 Gene

  • TRNAL42P

Summaries for NMTRL-TAA5-1 Gene

GeneCards Summary for NMTRL-TAA5-1 Gene

NMTRL-TAA5-1 (Nuclear-Encoded Mitochondrial Transfer RNA-Leu (TAA) 5-1) is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for NMTRL-TAA5-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NMTRL-TAA5-1 Gene

Genomics for NMTRL-TAA5-1 Gene

GeneHancer (GH) Regulatory Elements for NMTRL-TAA5-1 Gene

Promoters and enhancers for NMTRL-TAA5-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20I057359 Promoter 0.5 EPDnew 550.8 -0.8 -767 0.1 GC20M057367 MTND1P9 MTRNR2L3 NMTRL-TAA5-1 LOC100291105 RBM38 RAE1
GH20I057361 Promoter 0.5 EPDnew 550.8 -1.5 -1497 0.1 GC20M057367 MTND1P9 MTRNR2L3 NMTRL-TAA5-1 RAE1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around NMTRL-TAA5-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NMTRL-TAA5-1 Gene

Genomic Locations for NMTRL-TAA5-1 Gene
chr20:57,358,372-57,358,446
(GRCh38/hg38)
Size:
75 bases
Orientation:
Minus strand
chr20:55,933,428-55,933,502
(GRCh37/hg19)

Genomic View for NMTRL-TAA5-1 Gene

Genes around NMTRL-TAA5-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NMTRL-TAA5-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NMTRL-TAA5-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NMTRL-TAA5-1 Gene

Proteins for NMTRL-TAA5-1 Gene

Post-translational modifications for NMTRL-TAA5-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NMTRL-TAA5-1 Gene

Domains & Families for NMTRL-TAA5-1 Gene

Gene Families for NMTRL-TAA5-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with NMTRL-TAA5-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NMTRL-TAA5-1 Gene

Function for NMTRL-TAA5-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NMTRL-TAA5-1 Gene

Localization for NMTRL-TAA5-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NMTRL-TAA5-1 Gene

Pathways & Interactions for NMTRL-TAA5-1 Gene

SuperPathways for NMTRL-TAA5-1 Gene

No Data Available

Interacting Proteins for NMTRL-TAA5-1 Gene

Gene Ontology (GO) - Biological Process for NMTRL-TAA5-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NMTRL-TAA5-1 Gene

Drugs & Compounds for NMTRL-TAA5-1 Gene

No Compound Related Data Available

Transcripts for NMTRL-TAA5-1 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for NMTRL-TAA5-1 Gene

No ASD Table

Relevant External Links for NMTRL-TAA5-1 Gene

GeneLoc Exon Structure for
NMTRL-TAA5-1
ECgene alternative splicing isoforms for
NMTRL-TAA5-1

No data available for mRNA/cDNA for NMTRL-TAA5-1 Gene

Expression for NMTRL-TAA5-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NMTRL-TAA5-1 Gene

Orthologs for NMTRL-TAA5-1 Gene

No data available for Orthologs and Evolution for NMTRL-TAA5-1 Gene

Paralogs for NMTRL-TAA5-1 Gene

No data available for Paralogs for NMTRL-TAA5-1 Gene

Variants for NMTRL-TAA5-1 Gene

Additional Variant Information for NMTRL-TAA5-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NMTRL-TAA5-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NMTRL-TAA5-1 Gene

Disorders for NMTRL-TAA5-1 Gene

No disorders were found for NMTRL-TAA5-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NMTRL-TAA5-1 Gene

Publications for NMTRL-TAA5-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 58

Products for NMTRL-TAA5-1 Gene

Sources for NMTRL-TAA5-1 Gene

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