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Aliases for NLK Gene
Aliases for NLK Gene
External Ids for NLK Gene
- HGNC: 29858
- Entrez Gene: 51701
- Ensembl: ENSG00000087095
- OMIM: 609476
- UniProtKB: Q9UBE8
Previous GeneCards Identifiers for NLK Gene
- GC17P026225
- GC17P028269
- GC17P026515
- GC17P026514
- GC17P023393
- GC17P026369
- GC17P022577
Summaries for NLK Gene
GeneCards Summary for NLK Gene
NLK (Nemo Like Kinase) is a Protein Coding gene. Among its related pathways are Signaling by GPCR and Regulation of activated PAK-2p34 by proteasome mediated degradation. Gene Ontology (GO) annotations related to this gene include transferase activity, transferring phosphorus-containing groups and protein tyrosine kinase activity. An important paralog of this gene is MAPK7.
UniProtKB/Swiss-Prot Summary for NLK Gene
-
Serine/threonine-protein kinase that regulates a number of transcription factors with key roles in cell fate determination. Positive effector of the non-canonical Wnt signaling pathway, acting downstream of WNT5A, MAP3K7/TAK1 and HIPK2. Activation of this pathway causes binding to and phosphorylation of the histone methyltransferase SETDB1. The NLK-SETDB1 complex subsequently interacts with PPARG, leading to methylation of PPARG target promoters at histone H3K9 and transcriptional silencing. The resulting loss of PPARG target gene transcription inhibits adipogenesis and promotes osteoblastogenesis in mesenchymal stem cells (MSCs). Negative regulator of the canonical Wnt/beta-catenin signaling pathway. Binds to and phosphorylates TCF7L2/TCF4 and LEF1, promoting the dissociation of the TCF7L2/LEF1/beta-catenin complex from DNA, as well as the ubiquitination and subsequent proteolysis of LEF1. Together these effects inhibit the transcriptional activation of canonical Wnt/beta-catenin target genes. Negative regulator of the Notch signaling pathway. Binds to and phosphorylates NOTCH1, thereby preventing the formation of a transcriptionally active ternary complex of NOTCH1, RBPJ/RBPSUH and MAML1. Negative regulator of the MYB family of transcription factors. Phosphorylation of MYB leads to its subsequent proteolysis while phosphorylation of MYBL1 and MYBL2 inhibits their interaction with the coactivator CREBBP. Other transcription factors may also be inhibited by direct phosphorylation of CREBBP itself. Acts downstream of IL6 and MAP3K7/TAK1 to phosphorylate STAT3, which is in turn required for activation of NLK by MAP3K7/TAK1. Upon IL1B stimulus, cooperates with ATF5 to activate the transactivation activity of C/EBP subfamily members. Phosphorylates ATF5 but also stabilizes ATF5 protein levels in a kinase-independent manner (PubMed:25512613).
Additional gene information for NLK Gene
- HGNC(29858)
- Entrez Gene(51701)
- Ensembl(ENSG00000087095)
- OMIM(609476)
- UniProtKB(Q9UBE8)
- Open Targets Platform(ENSG00000087095)
- Monarch Initiative
- Search for NLK at DataMed
- Search for NLK at HumanCyc
No data available for Entrez Gene Summary , CIViC Summary , Tocris Summary , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NLK Gene
Genomics for NLK Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for NLK Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around NLK on the GeneHancer Hub at the UCSC Golden Path
Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for NLK
- Top Transcription factor binding sites by QIAGEN in the NLK gene promoter:
-
- E2F
- E2F-2
- E2F-3a
- E2F-4
- E2F-5
- p300
- PPAR-gamma1
- PPAR-gamma2
Genomic Locations for NLK Gene
Genomic Locations for NLK Gene
- chr17:28,041,737-28,205,140
- (GRCh38/hg38)
- Size:
- 163,404 bases
- Orientation:
- Plus strand
- chr17:26,368,763-26,523,407
- (GRCh37/hg19)
- Size:
- 154,645 bases
- Orientation:
- Plus strand
Genomic View for NLK Gene
Genes around NLK on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 17q11.2 by HGNC
- 17q11.2 by Entrez Gene
- 17q11.2 by Ensembl
NLK Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for NLK Gene
Proteins for NLK Gene
-
Protein details for NLK Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q9UBE8-NLK_HUMAN
- Recommended name:
- Serine/threonine-protein kinase NLK
- Protein Accession:
- Q9UBE8
- B2RCX1
- Q2PNI9
- Q6P2A3
Protein attributes for NLK Gene
- Size:
- 527 amino acids
- Molecular mass:
- 58283 Da
- Cofactor:
- Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
- Quaternary structure:
-
- Homodimer. Homodimerization is required for intermolecular autophosphorylation, kinase activation and nuclear localization (By similarity). May interact with components of cullin-RING-based SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complexes (By similarity). Interacts with LEF1, MEF2A, MYBL1 and MYBL2 (By similarity). Interacts with the upstream activating kinases HIPK2 and MAP3K7/TAK1. Interaction with MAP3K7/TAK1 seems to be indirect, and may be mediated by other proteins such as STAT3, TAB1 and TAB2. Interacts with and phosphorylates a number of transcription factors including FOXO1, FOXO3, FOXO4, MYB, NOTCH1 and TCF7L2/TCF4. Interacts with DAPK3/ZIPK, and this interaction may disrupt interaction with transcription factors such as TCF7L2/TCF4. Forms a transcriptional repressor complex with CHD7, PPARG and SETDB1. Interacts with RNF138/NARF. Interacts with ATF5; the interaction stabilizes ATF5 at the protein level in a kinase-independent manner (PubMed:25512613).
- SequenceCaution:
-
- Sequence=AAD56013.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305}; Sequence=AAF04857.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305}; Sequence=ABC40748.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305}; Sequence=BAG37718.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
Protein Expression for NLK Gene
Selected DME Specific Peptides for NLK Gene
- Q9UBE8:
-
- TDLLGTP
- GKRVALKKMPNVFQNL
- WSVGCIFAE
- KPGNLLVN
- WSVGCIFAELLGR
- LRGLKYLHSA
- YQILRGLKY
- LKICDFG
- PDRPIGYGAFGVVWSVTDPR
- SCKRVFRE
- DIWSVGCI
- FDPSKRI
- HRDIKPGN
- LKICDFGLAR
Post-translational modifications for NLK Gene
- Phosphorylated on Thr-298. Intermolecular autophosphorylation on Thr-298 activates the enzyme.
- Modification sites at PhosphoSitePlus
- Modification sites at neXtProt
Other Protein References for NLK Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
- G Biosciences Immunotag™ NLK Antibody (ITA7602-100u) and Immunotag™ NLK Antibody (ITA7305-100u)
- GeneTex Anti-NLK antibody [N3C3] and Anti-NLK antibody
- Creative Diagnostics Anti-NLK monoclonal antibody, clone FQS3123(3)
- Creative Biolabs Recombinant Mouse Anti-Human NLK Antibody
-
Custom Antibody ServicesOriGene Antibodies for NLK
- Novus Biologicals Antibodies for NLK
-
Abcam antibodies for NLK
- Invitrogen Antibodies for NLK (AFLGC-NLK)
-
Boster Bio Antibodies for NLK
- Sino Biological Antibodies for NLK
Protein Products
- Search Origene for MassSpec and Protein Over-expression Lysates for NLK
- Origene Custom Protein Services for NLK
- Sino Biological Recombinant Proteins for NLK
- Sino Biological Cell Lysates for NLK
- antibodies-online: Show 11 available NLK Proteins ranked by validation data
- Compare Top NLK Proteins
-
Abcam proteins for NLK
Assay Products
- antibodies-online: Show 8 available NLK Elisa Kits ranked by validation data
- Compare Top NLK Elisa Kits
-
Quality Products:
Domains & Families for NLK Gene
Gene Families for NLK Gene
- IUPHAR :
- Human Protein Atlas (HPA):
-
- Enzymes
- Predicted intracellular proteins
Protein Domains for NLK Gene
- InterPro:
- Blocks:
-
- MAP kinase
- ProtoNet:
Suggested Antigen Peptide Sequences for NLK Gene
- GenScript: Design optimal peptide antigens:
-
- Protein LAK1 (NLK_HUMAN)
Graphical View of Domain Structure for InterPro Entry
Q9UBE8UniProtKB/Swiss-Prot:
NLK_HUMAN :- Contains a TQE activation loop motif in which autophosphorylation of the threonine residue (Thr-298) is sufficient for kinase activation. This mode of activation contrasts with that of classical MAP kinases, which contain a TXY activation loop motif in which phosphorylation of both the threonine and tyrosine residues is required for kinase activation.
- Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.
- Domain:
-
- Contains a TQE activation loop motif in which autophosphorylation of the threonine residue (Thr-298) is sufficient for kinase activation. This mode of activation contrasts with that of classical MAP kinases, which contain a TXY activation loop motif in which phosphorylation of both the threonine and tyrosine residues is required for kinase activation.
- Family:
-
- Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.
Function for NLK Gene
Molecular function for NLK Gene
- UniProtKB/Swiss-Prot Function:
- Serine/threonine-protein kinase that regulates a number of transcription factors with key roles in cell fate determination. Positive effector of the non-canonical Wnt signaling pathway, acting downstream of WNT5A, MAP3K7/TAK1 and HIPK2. Activation of this pathway causes binding to and phosphorylation of the histone methyltransferase SETDB1. The NLK-SETDB1 complex subsequently interacts with PPARG, leading to methylation of PPARG target promoters at histone H3K9 and transcriptional silencing. The resulting loss of PPARG target gene transcription inhibits adipogenesis and promotes osteoblastogenesis in mesenchymal stem cells (MSCs). Negative regulator of the canonical Wnt/beta-catenin signaling pathway. Binds to and phosphorylates TCF7L2/TCF4 and LEF1, promoting the dissociation of the TCF7L2/LEF1/beta-catenin complex from DNA, as well as the ubiquitination and subsequent proteolysis of LEF1. Together these effects inhibit the transcriptional activation of canonical Wnt/beta-catenin target genes. Negative regulator of the Notch signaling pathway. Binds to and phosphorylates NOTCH1, thereby preventing the formation of a transcriptionally active ternary complex of NOTCH1, RBPJ/RBPSUH and MAML1. Negative regulator of the MYB family of transcription factors. Phosphorylation of MYB leads to its subsequent proteolysis while phosphorylation of MYBL1 and MYBL2 inhibits their interaction with the coactivator CREBBP. Other transcription factors may also be inhibited by direct phosphorylation of CREBBP itself. Acts downstream of IL6 and MAP3K7/TAK1 to phosphorylate STAT3, which is in turn required for activation of NLK by MAP3K7/TAK1. Upon IL1B stimulus, cooperates with ATF5 to activate the transactivation activity of C/EBP subfamily members. Phosphorylates ATF5 but also stabilizes ATF5 protein levels in a kinase-independent manner (PubMed:25512613).
- UniProtKB/Swiss-Prot CatalyticActivity:
- Reaction=ATP + L-seryl-[protein] = ADP + H(+) + O-phospho-L-seryl-[protein]; Xref=Rhea:RHEA:17989, Rhea:RHEA-COMP:9863, Rhea:RHEA-COMP:11604, ChEBI:CHEBI:15378, ChEBI:CHEBI:29999, ChEBI:CHEBI:30616, ChEBI:CHEBI:83421, ChEBI:CHEBI:456216; EC=2.7.11.24;.
- UniProtKB/Swiss-Prot CatalyticActivity:
- Reaction=ATP + L-threonyl-[protein] = ADP + H(+) + O-phospho-L-threonyl-[protein]; Xref=Rhea:RHEA:46608, Rhea:RHEA-COMP:11060, Rhea:RHEA-COMP:11605, ChEBI:CHEBI:15378, ChEBI:CHEBI:30013, ChEBI:CHEBI:30616, ChEBI:CHEBI:61977, ChEBI:CHEBI:456216; EC=2.7.11.24;.
- UniProtKB/Swiss-Prot EnzymeRegulation:
- Activated by dimerization and subsequent intermolecular autophosphorylation on Thr-298 (By similarity). Activated by the non-canonical Wnt signaling pathway, in which WNT5A treatment leads to activation of MAP3K7/TAK1 and HIPK2, which subsequently phosphorylates and activates this protein. Other cytokines such as IL6 may also activate this regulatory circuit.
Enzyme Numbers (IUBMB) for NLK Gene
Phenotypes From GWAS Catalog for NLK Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0000166 | nucleotide binding | IEA | -- |
| GO:0000287 | magnesium ion binding | ISS | -- |
| GO:0004672 | protein kinase activity | IEA,TAS | 10863097 |
| GO:0004674 | protein serine/threonine kinase activity | IEA,TAS | -- |
| GO:0004707 | MAP kinase activity | IEA,ISS | -- |
Phenotypes for NLK Gene
- MGI mutant phenotypes for NLK:
- inferred from 5 alleles
- GenomeRNAi human phenotypes for NLK:
-
- Increased vaccinia virus (VACV) infection
- Mildly decreased CFP-tsO45G cell surface transport
- no effect
- Decreased viability
- Resistant to vaccinia virus (VACV-A4L) infection
- Decreased viability ratio
- Decreased shRNA abundance (Z-score < -2)
- Increased apoptosis
- Downregulation of Wnt pathway after Wnt3A stimulation
- Decreased Hepatitis C virus replication
- Decreased viability after Maraba virus infection
- Increased shRNA abundance (Z-score > 2)
- Increased cell viability after pRB stimulation
- Decreased melanin production
- Decreased TP53 protein expression ratio (wild-type / TP53 knockout cells)
- Decreased focal adhesion (FA) area, decreased FA length, decreased FA mean intensity, increased number of small and round FAs
- Decreased cell proliferation
- Diffuse trans-Golgi
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for NLK - Select products 50% OFF >
- * NLK CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
OriGene CRISPR knockouts for NLK
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for NLK
-
Santa Cruz Biotechnology (SCBT) CRISPR for NLK
miRNA for NLK Gene
- miRTarBase miRNAs that target NLK
-
- hsa-miR-181c-5p (MIRT000233)
- hsa-miR-181b-5p (MIRT000238)
- hsa-miR-181a-5p (MIRT000243)
- mmu-let-7b-5p (MIRT012187)
- hsa-miR-215-5p (MIRT024563)
- hsa-miR-192-5p (MIRT026531)
- hsa-miR-92b-3p (MIRT035518)
- hsa-miR-23a-3p (MIRT050387)
- hsa-miR-199b-5p (MIRT054629)
- hsa-miR-101-3p (MIRT438193)
- hsa-miR-3682-5p (MIRT472135)
- hsa-miR-513a-5p (MIRT472136)
- hsa-miR-545-3p (MIRT472137)
- hsa-miR-3120-3p (MIRT472138)
- hsa-miR-5692a (MIRT472139)
- hsa-miR-27a-3p (MIRT472140)
- hsa-miR-27b-3p (MIRT472141)
- hsa-miR-190a-3p (MIRT522254)
- hsa-miR-5011-5p (MIRT522255)
- hsa-miR-1277-5p (MIRT522256)
- hsa-miR-3121-3p (MIRT522257)
- hsa-miR-548c-3p (MIRT522258)
- hsa-miR-574-5p (MIRT627953)
- hsa-miR-6818-5p (MIRT627954)
- hsa-miR-664b-3p (MIRT627955)
- hsa-miR-579-3p (MIRT627956)
- hsa-miR-5696 (MIRT627957)
- hsa-miR-6867-5p (MIRT627958)
- hsa-miR-1304-3p (MIRT627959)
- hsa-miR-153-5p (MIRT627960)
- hsa-miR-1250-3p (MIRT627961)
- hsa-miR-1285-5p (MIRT627962)
- hsa-miR-216a-5p (MIRT627963)
- hsa-miR-6802-5p (MIRT701392)
- hsa-miR-6800-5p (MIRT701393)
- hsa-miR-6822-3p (MIRT701394)
- hsa-miR-3622b-5p (MIRT701395)
- hsa-miR-6770-5p (MIRT701396)
- hsa-miR-1253 (MIRT701397)
- hsa-miR-6741-3p (MIRT701398)
- hsa-miR-135a-3p (MIRT701399)
- hsa-miR-6865-5p (MIRT701400)
- hsa-miR-6815-5p (MIRT701401)
- hsa-miR-3158-3p (MIRT701402)
- hsa-miR-4446-3p (MIRT701403)
- hsa-miR-5088-5p (MIRT701404)
- hsa-miR-944 (MIRT701405)
- hsa-miR-409-3p (MIRT733422)
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for NLK
- Browse OriGene Inhibitory RNA Products For NLK
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for NLK
Clone Products
- Applied Biological Materials (abm): Clones for NLK - Select products 50% OFF >
- * NLK as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Sino Biological Human cDNA Clone for NLK
- Addgene plasmids for NLK
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for NLK
Cell Line Products
-
Horizon Cell Lines for NLK
No data available for Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for NLK Gene
Localization for NLK Gene
Subcellular locations from UniProtKB/Swiss-Prot for NLK Gene
- Nucleus. Cytoplasm. Note=Predominantly nuclear. A smaller fraction is cytoplasmic (By similarity). {ECO:0000250}.
| Compartment | Confidence |
|---|---|
| nucleus | 5 |
| cytosol | 4 |
| extracellular | 2 |
| cytoskeleton | 2 |
| plasma membrane | 1 |
| mitochondrion | 1 |
| peroxisome | 1 |
| endoplasmic reticulum | 1 |
| endosome | 1 |
| lysosome | 1 |
| golgi apparatus | 1 |
- Cell Junctions (3)
- Nucleoli (3)
- Nucleoplasm (3)
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005634 | nucleus | TAS,ISS | -- |
| GO:0005654 | nucleoplasm | TAS | -- |
| GO:0005737 | cytoplasm | IBA | 21873635 |
| GO:0005829 | cytosol | TAS | -- |
Pathways & Interactions for NLK Gene
| SuperPathway | Contained pathways | ||
|---|---|---|---|
| 1 | MAPK signaling pathway | ||
| 2 | Wnt signaling pathway | ||
| 3 | Regulation of activated PAK-2p34 by proteasome mediated degradation |
.41
|
|
| 4 | Mesodermal Commitment Pathway | ||
| 5 | Wnt / Hedgehog / Notch | ||
Pathways by source for NLK Gene
1 Sino Biological pathway for NLK Gene
10 BioSystems pathways for NLK Gene
4 Reactome pathways for NLK Gene
4 KEGG pathways for NLK Gene
2 R&D Systems pathways for NLK Gene
1 Qiagen pathway for NLK Gene
- Molecular Mechanisms of Cancer
1 Cell Signaling Technology pathway for NLK Gene
1 GeneTex pathway for NLK Gene
Interacting Proteins for NLK Gene
Selected Interacting proteins:
Q9UBE8-NLK_HUMAN
ENSP00000384625
for NLK Gene via
UniProtKB
MINT
STRING
IID
GPS-Prot Interaction Network for NLK
SIGNOR curated interactions for NLK Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0000165 | MAPK cascade | IEA | -- |
| GO:0006355 | regulation of transcription, DNA-templated | ISS | -- |
| GO:0006468 | protein phosphorylation | IEA,ISS | -- |
| GO:0007179 | transforming growth factor beta receptor signaling pathway | IMP | 15004007 |
| GO:0007223 | Wnt signaling pathway, calcium modulating pathway | TAS | -- |
Drugs & Compounds for NLK Gene
| Name | Status | Disease Links | Group | Role | Mechanism of Action | Clinical Trials |
|---|---|---|---|---|---|---|
| Magnesium | Approved, Experimental, Investigational | Pharma | 0 |
Transcripts for NLK Gene
mRNA/cDNA for NLK Gene
- 1 REFSEQ mRNAs :
- 12 NCBI additional mRNA sequence :
- 6 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000407008 3526 nts (view in UCSC)
- ENST00000496808 1702 nts (view in UCSC)
- ENST00000582037 1503 nts (view in UCSC)
- ENST00000583517 695 nts (view in UCSC)
- ENST00000584188 451 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for NLK - Select products 50% OFF >
- * NLK CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
OriGene CRISPR knockouts for NLK
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for NLK
-
Santa Cruz Biotechnology (SCBT) CRISPR for NLK
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for NLK
- Browse OriGene Inhibitory RNA Products For NLK
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for NLK
Clone Products
- Applied Biological Materials (abm): Clones for NLK - Select products 50% OFF >
- * NLK as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Sino Biological Human cDNA Clone for NLK
- Addgene plasmids for NLK
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for NLK
Relevant External Links for NLK Gene
- GeneLoc Exon Structure for
- NLK
Expression for NLK Gene
mRNA differential expression in normal tissues according to GTEx for NLK Gene
This gene is overexpressed in Brain - Cortex (x5.0) and Brain - Frontal Cortex (BA9) (x5.0).
This gene is overexpressed in Brain (49.1) and Retina (19.9).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for NLK Gene
- Elite partner
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for NLK
SOURCE GeneReport for Unigene cluster for NLK Gene:
Hs.208759Evidence on tissue expression from TISSUES for NLK Gene
- Nervous system(4.7)
- Blood(4.4)
- Eye(2.6)
- Kidney(2.1)
- Intestine(2.1)
- Bone marrow(2.1)
- Lung(2)
Primer Products
-
OriGene qPCR primer pairs for NLK
-
OriGene qPCR primer pairs and template standards for NLK
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for NLK Gene
Orthologs for NLK Gene
This gene was present in the common ancestor of animals.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| Platypus (Ornithorhynchus anatinus) |
Mammalia | NLK 31 |
|
OneToOne | |
| Chimpanzee (Pan troglodytes) |
Mammalia | NLK 30 31 |
|
OneToOne | |
| Oppossum (Monodelphis domestica) |
Mammalia | NLK 31 |
|
OneToOne | |
| Dog (Canis familiaris) |
Mammalia | NLK 30 31 |
|
OneToOne | |
| Cow (Bos Taurus) |
Mammalia | NLK 30 31 |
|
OneToOne | |
| Rat (Rattus norvegicus) |
Mammalia | Nlk 30 |
|
||
| Mouse (Mus musculus) |
Mammalia | Nlk 30 17 31 |
|
OneToOne | |
| Chicken (Gallus gallus) |
Aves | NLK 30 31 |
|
OneToOne | |
| Lizard (Anolis carolinensis) |
Reptilia | NLK 31 |
|
OneToOne | |
| Tropical Clawed Frog (Silurana tropicalis) |
Amphibia | nlk 30 |
|
||
| Str.7425 30 |
|
||||
| African clawed frog (Xenopus laevis) |
Amphibia | xnlk 30 |
|
||
| Zebrafish (Danio rerio) |
Actinopterygii | nlk2 30 31 |
|
OneToOne | |
| African malaria mosquito (Anopheles gambiae) |
Insecta | AgaP_AGAP005898 30 |
|
||
| Fruit Fly (Drosophila melanogaster) |
Insecta | nmo 30 31 32 |
|
OneToOne | |
| Worm (Caenorhabditis elegans) |
Secernentea | lit-1 30 31 |
|
OneToOne | |
| Sea Squirt (Ciona savignyi) |
Ascidiacea | CSA.3781 31 |
|
OneToOne |
- Species where no ortholog for NLK was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Eremothecium gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- Alicante grape (Vitis vinifera)
- Alpha proteobacteria (Wolbachia pipientis)
- Amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- Baker's yeast (Saccharomyces cerevisiae)
- Barley (Hordeum vulgare)
- Beta proteobacteria (Neisseria meningitidis)
- Bread mold (Neurospora crassa)
- Chromalveolata (Phytophthora infestans)
- Common water flea (Daphnia pulex)
- Corn (Zea mays)
- E. coli (Escherichia coli)
- Filamentous fungi (Aspergillus nidulans)
- Firmicute Bacteria (Streptococcus pneumoniae)
- Fission Yeast (Schizosaccharomyces pombe)
- Green Algae (Chlamydomonas reinhardtii)
- Honey Bee (Apis mellifera)
- K. Lactis Yeast (Kluyveromyces lactis)
- Loblloly Pine (Pinus taeda)
- Malaria Parasite (Plasmodium falciparum)
- Medicago Trunc (Medicago Truncatula)
- Moss (Physcomitrella patens)
- Orangutan (Pongo pygmaeus)
- Pig (Sus scrofa)
- Rainbow Trout (Oncorhynchus mykiss)
- Rice (Oryza sativa)
- Rice Blast Fungus (Magnaporthe grisea)
- Schistosome Parasite (Schistosoma mansoni)
- Sea Anemone (Nematostella vectensis)
- Sea Vase (Ciona intestinalis)
- Sea Urchin (Strongylocentrotus purpuratus)
- Sorghum (Sorghum bicolor)
- Soybean (Glycine max)
- Stem Rust Fungus (Puccinia graminis)
- Sugarcane (Saccharum officinarum)
- Thale Cress (Arabidopsis thaliana)
- Tomato (Lycopersicon esculentum)
- Toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- Wheat (Triticum aestivum)
Evolution for NLK Gene
- ENSEMBL:
- Gene Tree for NLK (if available)
- TreeFam:
- Gene Tree for NLK (if available)
- Aminode:
- Evolutionary constrained regions (ECRs) for NLK: view image
Paralogs for NLK Gene
Paralogs for NLK Gene
(47) SIMAP similar genes for NLK Gene using alignment to 3 proteins:
- NLK_HUMAN
- H0YD75_HUMAN
- J3QSE9_HUMAN
Variants for NLK Gene
Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for NLK Gene
| SNP ID | Clinical significance and condition | Chr 17 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| VAR_042273 | A glioblastoma multiforme sample | p.Ala343Thr | |||
| rs11871287 | - | p.Val177Ala |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| esv2678164 | CNV | deletion | 23128226 |
| esv3353471 | CNV | insertion | 20981092 |
| nsv2016 | CNV | deletion | 18451855 |
| nsv522349 | CNV | gain | 19592680 |
Residual Variation Intolerance Score:
23.4% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score:
0.59;
12.76% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for NLK Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- NLK
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for NLK Gene
Disorders for NLK Gene
Additional Disease Information for NLK
- Genetic Association Database
- (GAD)
- Human Genome Epidemiology Navigator
- (HuGE)
- ATLAS of Genetics and Cytogenetics in Oncology and Haematology
- Open Targets Platform
No disorders were found for NLK Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NLK Gene
Publications for NLK Gene
- Characterization of the Fugu rubripes NLK and FN5 genes flanking the NF1 (Neurofibromatosis type 1) gene in the 5' direction and mapping of the human counterparts. (PMID: 10863097) Kehrer-Sawatzki H … Krone W (Gene 2000) 2 3 4 23
- Regulation of FOXO1 by TAK1-Nemo-like kinase pathway. (PMID: 20061393) Kim S … Chung J (The Journal of biological chemistry 2010) 3 4 23
- STAT3 regulates Nemo-like kinase by mediating its interaction with IL-6-stimulated TGFbeta-activated kinase 1 for STAT3 Ser-727 phosphorylation. (PMID: 15764709) Kojima H … Nakajima K (Proceedings of the National Academy of Sciences of the United States of America 2005) 3 4 23
- Wnt-1 signal induces phosphorylation and degradation of c-Myb protein via TAK1, HIPK2, and NLK. (PMID: 15082531) Kanei-Ishii C … Ishii S (Genes & development 2004) 3 4 23
- Stabilization of ATF5 by TAK1-Nemo-like kinase critically regulates the interleukin-1β-stimulated C/EBP signaling pathway. (PMID: 25512613) Zhang ZY … Zhang XD (Molecular and cellular biology 2015) 3 4
ExternalLinks
Products for NLK Gene
- Custom Antibody ServicesOriGene Antibodies for NLK
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for MassSpec and Protein Over-expression Lysates for NLK
- Origene Custom Protein Services for NLK
- Origene shrna, sirna, and RNAi products in human, mouse, rat for NLK
- Browse OriGene Inhibitory RNA Products For NLK
- OriGene qPCR primer pairs for NLK
- OriGene qPCR primer pairs and template standards for NLK
- OriGene CRISPR knockouts for NLK
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For NLK
- Sino Biological Human cDNA Clone for NLK
- Sino Biological Recombinant Proteins for NLK
- Sino Biological Cell Lysates for NLK
- Sino Biological Antibodies for NLK
- Browse Sino Biological Assays
- Browse Recombinant Proteins
- Browse Antibodies
- Browse cDNA Clones
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Novus Biologicals Antibodies for NLK
- Novus Biologicals proteins and lysates for NLK
- Browse Antibodies
- Browse Peptides and Proteins
- Browse Lysates
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- Abcam antibodies for NLK
- Abcam proteins for NLK
- Find your target
- Browse Primary Antibodies
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- Browse Proteins and Peptides
- Search Knockout (KO) Validated Antibodies
- Browse Monoclonal Antibodies
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- Invitrogen Antibodies for NLK (AFLGC-NLK)
- VectorBuilder Custom and pre-made DNA vectors for NLK (ie. gene expression, shRNA knockdown, CRISPR)
- VectorBuilder Viral vectors for NLK (ie. lentivirus, AAV, adenovirus)
- VectorBuilder CRISPR vectors for NLK (ie. knockout, knockin, CRISPRa, CRISPRi)
- VectorBuilder Virus packaging for NLK CRISPR vectors (ie. lentivirus, AAV, adenovirus)
- VectorBuilder Stable cell line generation for NLK
- Addgene plasmids for NLK
- antibodies-online: Show 109 available NLK Antibodies ranked by validation data
- Compare Top NLK Antibodies
- antibodies-online: Show 8 available NLK Elisa Kits ranked by validation data
- Compare Top NLK Elisa Kits
- Quality Products:
- antibodies-online: Show 11 available NLK Proteins ranked by validation data
- Compare Top NLK Proteins
- Search Santa Cruz Biotechnology (SCBT) for NLK siRNA/shRNA
- Santa Cruz Biotechnology (SCBT) CRISPR for NLK
- Horizon Cell Lines for NLK
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for NLK
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for NLK
- Search GeneCopoeia for miRNA 3'UTR Target clone products for NLK
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for NLK
- Boster Bio Antibodies for NLK
- Browse Boster Bio ELISA Kits
Sources for NLK Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB