Aliases for NINJ2-AS1 Gene

Subcategory (RNA class) for NINJ2-AS1 Gene


Number of RNA Genes sources:

4 / 17

Aliases for NINJ2-AS1 Gene

  • NINJ2 Antisense RNA 1 2 3 5
  • NINJ2-AS1 2 5
  • NONHSAG010146.2 91
  • Lnc-B4GALNT3-2 165
  • HSALNG0088498 164

External Ids for NINJ2-AS1 Gene

Summaries for NINJ2-AS1 Gene

GeneCards Summary for NINJ2-AS1 Gene

NINJ2-AS1 (NINJ2 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for NINJ2-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NINJ2-AS1 Gene

Genomics for NINJ2-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for NINJ2-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NINJ2-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for NINJ2-AS1 Gene

Genomic Locations for NINJ2-AS1 Gene
33,339 bases
Plus strand
32,816 bases
Plus strand

Genomic View for NINJ2-AS1 Gene

Genes around NINJ2-AS1 on UCSC Golden Path with GeneCards custom track
NINJ2-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
NINJ2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NINJ2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NINJ2-AS1 Gene

Proteins for NINJ2-AS1 Gene

Post-translational modifications for NINJ2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NINJ2-AS1 Gene

Domains & Families for NINJ2-AS1 Gene

Gene Families for NINJ2-AS1 Gene

Suggested Antigen Peptide Sequences for NINJ2-AS1 Gene

GenScript: Design optimal peptide antigens:
  • LOC100049716 protein (Q8N503_HUMAN)
genes like me logo Genes that share domains with NINJ2-AS1: view

No data available for Protein Domains , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NINJ2-AS1 Gene

Function for NINJ2-AS1 Gene

Phenotypes From GWAS Catalog for NINJ2-AS1 Gene

Phenotypes for NINJ2-AS1 Gene

genes like me logo Genes that share phenotypes with NINJ2-AS1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NINJ2-AS1 Gene

Localization for NINJ2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NINJ2-AS1 Gene

Pathways & Interactions for NINJ2-AS1 Gene

PathCards logo

SuperPathways for NINJ2-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for NINJ2-AS1 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for NINJ2-AS1 Gene

Drugs & Compounds for NINJ2-AS1 Gene

No Compound Related Data Available

Transcripts for NINJ2-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for NINJ2-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000041CDB2_9606 lncRNA 2338 6

HGNC: 40405,

RefSeq: NR_122124,

Ensembl: ENST00000537514 (view in UCSC) ,

LncBook: HSALNT0184051,

LNCipedia: lnc-B4GALNT3-2:1, lnc-B4GALNT3-2:7,


URS000008F7F5_9606 lncRNA 2194 4

Ensembl: ENST00000318291 (view in UCSC) ,

LncBook: HSALNT0184057,

LNCipedia: lnc-B4GALNT3-2:3,


URS0000EEB439_9606 lncRNA 2545 1

Ensembl: ENST00000655409 (view in UCSC) ,

URS0000EF31F5_9606 lncRNA 2526 1

Ensembl: ENST00000670735 (view in UCSC) ,

URS0000EF4B99_9606 lncRNA 1967 1

Ensembl: ENST00000666212 (view in UCSC) ,

NINJ2-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for NINJ2-AS1 Gene

4 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for NINJ2-AS1 Gene

No ASD Table

Relevant External Links for NINJ2-AS1 Gene

GeneLoc Exon Structure for

Expression for NINJ2-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for NINJ2-AS1

SOURCE GeneReport for Unigene cluster for NINJ2-AS1 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NINJ2-AS1 Gene

Orthologs for NINJ2-AS1 Gene

Evolution for NINJ2-AS1 Gene

Gene Tree for NINJ2-AS1 (if available)
Gene Tree for NINJ2-AS1 (if available)

No data available for Orthologs for NINJ2-AS1 Gene

Paralogs for NINJ2-AS1 Gene

No data available for Paralogs for NINJ2-AS1 Gene

Variants for NINJ2-AS1 Gene

Additional dbSNP identifiers (rs#s) for NINJ2-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for NINJ2-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv1334n100 CNV gain 25217958
dgv2251n54 CNV gain 21841781
esv2759875 CNV gain+loss 17122850
esv29801 CNV loss 19812545
esv3892123 CNV gain 25118596
nsv1040579 CNV gain 25217958
nsv1042529 CNV gain 25217958
nsv1050781 CNV loss 25217958
nsv468951 CNV gain 19166990
nsv470254 CNV gain 18288195
nsv556885 CNV gain 21841781
nsv556887 CNV gain 21841781
nsv556893 CNV gain 21841781
nsv556894 CNV gain 21841781
nsv556895 CNV gain 21841781

Additional Variant Information for NINJ2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for NINJ2-AS1 Gene

Disorders for NINJ2-AS1 Gene

Additional Disease Information for NINJ2-AS1

No disorders were found for NINJ2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NINJ2-AS1 Gene

Publications for NINJ2-AS1 Gene

  1. The lacrimal gland transcriptome is an unusually rich source of rare and poorly characterized gene transcripts. (PMID: 15851553) Ozyildirim AM … Laurie GW (Investigative ophthalmology & visual science 2005) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

No data available for Mastermind for NINJ2-AS1 Gene

Products for NINJ2-AS1 Gene

Sources for NINJ2-AS1 Gene