Aliases for NFIA-AS2 Gene

Subcategory (RNA class) for NFIA-AS2 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for NFIA-AS2 Gene

  • NFIA Antisense RNA 2 2 3 5
  • NFIA-AS2 2 168
  • HSALNG0004009 167
  • NONHSAG001657 92

External Ids for NFIA-AS2 Gene

Summaries for NFIA-AS2 Gene

GeneCards Summary for NFIA-AS2 Gene

NFIA-AS2 (NFIA Antisense RNA 2) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for NFIA-AS2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NFIA-AS2 Gene

Genomics for NFIA-AS2 Gene

GeneHancer (GH) Regulatory Elements for NFIA-AS2 Gene

Promoters and enhancers for NFIA-AS2 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NFIA-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NFIA-AS2 Gene

Genomic Locations for NFIA-AS2 Gene
chr1:60,912,675-61,056,885
(GRCh38/hg38)
Size:
144,211 bases
Orientation:
Minus strand
chr1:61,405,911-61,436,448
(GRCh37/hg19)
Size:
30,538 bases
Orientation:
Minus strand

Genomic View for NFIA-AS2 Gene

Genes around NFIA-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NFIA-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NFIA-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NFIA-AS2 Gene

Proteins for NFIA-AS2 Gene

Post-translational modifications for NFIA-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NFIA-AS2 Gene

Domains & Families for NFIA-AS2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NFIA-AS2 Gene

Function for NFIA-AS2 Gene

Phenotypes From GWAS Catalog for NFIA-AS2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NFIA-AS2 Gene

Localization for NFIA-AS2 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for NFIA-AS2 gene
Compartment Confidence
cytosol 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NFIA-AS2 Gene

Pathways & Interactions for NFIA-AS2 Gene

PathCards logo

SuperPathways for NFIA-AS2 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for NFIA-AS2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for NFIA-AS2 Gene

Drugs & Compounds for NFIA-AS2 Gene

No Compound Related Data Available

Transcripts for NFIA-AS2 Gene

mRNA/cDNA for NFIA-AS2 Gene

25 RNACentral transcripts :
2 REFSEQ mRNAs :
3 NCBI additional mRNA sequence :
5 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
5 NONCODE transcripts :
8 LncBook transcripts :
19 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for NFIA-AS2 Gene

No ASD Table

Relevant External Links for NFIA-AS2 Gene

GeneLoc Exon Structure for
NFIA-AS2

Expression for NFIA-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NFIA-AS2 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for NFIA-AS2

genes like me logo Genes that share expression patterns with NFIA-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NFIA-AS2 Gene

Orthologs for NFIA-AS2 Gene

Evolution for NFIA-AS2 Gene

ENSEMBL:
Gene Tree for NFIA-AS2 (if available)
TreeFam:
Gene Tree for NFIA-AS2 (if available)

No data available for Orthologs for NFIA-AS2 Gene

Paralogs for NFIA-AS2 Gene

No data available for Paralogs for NFIA-AS2 Gene

Variants for NFIA-AS2 Gene

Additional dbSNP identifiers (rs#s) for NFIA-AS2 Gene

Structural Variations from Database of Genomic Variants (DGV) for NFIA-AS2 Gene

Variant ID Type Subtype PubMed ID
nsv1012657 CNV gain 25217958

Additional Variant Information for NFIA-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NFIA-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for NFIA-AS2 Gene

Disorders for NFIA-AS2 Gene

Additional Disease Information for NFIA-AS2

No disorders were found for NFIA-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NFIA-AS2 Gene

Publications for NFIA-AS2 Gene

  1. Genome-wide association study identifies three novel genetic markers associated with elite endurance performance. (PMID: 25729143) Ahmetov I … Govorun V (Biology of sport 2015) 3 54
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 54

Products for NFIA-AS2 Gene

Sources for NFIA-AS2 Gene