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Aliases for NEXN-AS1 Gene

Subcategory (RNA class) for NEXN-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for NEXN-AS1 Gene

  • NEXN Antisense RNA 1 2 3 4 5
  • NEXN Antisense RNA 1 (Non-Protein Coding) 2 3
  • C1orf118 3 4
  • Chromosome 1 Open Reading Frame 118 2

External Ids for NEXN-AS1 Gene

Previous HGNC Symbols for NEXN-AS1 Gene

  • C1orf118

Previous GeneCards Identifiers for NEXN-AS1 Gene

  • GC01M078348

Summaries for NEXN-AS1 Gene

GeneCards Summary for NEXN-AS1 Gene

NEXN-AS1 (NEXN Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for NEXN-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NEXN-AS1 Gene

Genomics for NEXN-AS1 Gene

GeneHancer (GH) Regulatory Elements for NEXN-AS1 Gene

Promoters and enhancers for NEXN-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I077886 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 556 +0.1 139 5 HDGF SIN3A DMAP1 ZNF2 ZNF121 GLIS2 FOS KLF13 YY2 REST NEXN-AS1 NEXN USP33 GIPC2 FUBP1 IFI44
GH01I077975 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.2 -88.7 -88743 5.5 CLOCK FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF143 SP3 SSRP1 ZNF610 GIPC2 DNAJB4 FUBP1 NSRP1P1 ENSG00000273338 USP33 ZZZ3 NEXN NEXN-AS1
GH01I077900 Enhancer 0.7 ENCODE dbSUPER 0.4 -11.3 -11332 0.2 CTCF ZNF654 ZNF143 SMC3 REST RAD21 RFX5 ACTG1P21 MIGA1 RNA5SP21 ZZZ3 NEXN NEXN-AS1 DNAJB4
GH01I077926 Promoter 0.9 Ensembl 0.3 -37.3 -37262 0.4 ATF4 L3MBTL2 ZNF512 JUNB ZSCAN29 CEBPG RUNX3 PRDM1 GIPC2 MIGA1 RNA5SP21 ACTG1P21 NEXN NEXN-AS1 DNAJB4
GH01I077884 Enhancer 0.2 FANTOM5 0.8 +4.6 4553 0.3 GC01P077888 GC01P077889 GC01P077899 GC01P077900 PIR49289 MIGA1 NEXN NEXN-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around NEXN-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NEXN-AS1 Gene

Genomic Locations for NEXN-AS1 Gene
8,192 bases
Minus strand

Genomic View for NEXN-AS1 Gene

Genes around NEXN-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NEXN-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NEXN-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NEXN-AS1 Gene

Proteins for NEXN-AS1 Gene

  • Protein details for NEXN-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative uncharacterized protein NEXN-AS1
    Protein Accession:

    Protein attributes for NEXN-AS1 Gene

    246 amino acids
    Molecular mass:
    25156 Da
    Quaternary structure:
    No Data Available

neXtProt entry for NEXN-AS1 Gene

Post-translational modifications for NEXN-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NEXN-AS1 Gene

Domains & Families for NEXN-AS1 Gene

Protein Domains for NEXN-AS1 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with NEXN-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NEXN-AS1 Gene

Function for NEXN-AS1 Gene

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NEXN-AS1 Gene

Localization for NEXN-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NEXN-AS1 Gene

Pathways & Interactions for NEXN-AS1 Gene

SuperPathways for NEXN-AS1 Gene

No Data Available

Interacting Proteins for NEXN-AS1 Gene

Gene Ontology (GO) - Biological Process for NEXN-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for NEXN-AS1 Gene

Drugs & Compounds for NEXN-AS1 Gene

No Compound Related Data Available

Transcripts for NEXN-AS1 Gene

mRNA/cDNA for NEXN-AS1 Gene

(2) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(6) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for NEXN-AS1 Gene

NEXN antisense RNA 1:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for NEXN-AS1 Gene

No ASD Table

Relevant External Links for NEXN-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for NEXN-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NEXN-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for NEXN-AS1 Gene

This gene is overexpressed in Muscle - Skeletal (x7.2) and Heart - Left Ventricle (x5.6).

Protein differential expression in normal tissues from HIPED for NEXN-AS1 Gene

This gene is overexpressed in CD4 Tcells (67.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for NEXN-AS1 Gene

Protein tissue co-expression partners for NEXN-AS1 Gene

SOURCE GeneReport for Unigene cluster for NEXN-AS1 Gene:

genes like me logo Genes that share expression patterns with NEXN-AS1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NEXN-AS1 Gene

Orthologs for NEXN-AS1 Gene

Evolution for NEXN-AS1 Gene

Gene Tree for NEXN-AS1 (if available)
Gene Tree for NEXN-AS1 (if available)

No data available for Orthologs for NEXN-AS1 Gene

Paralogs for NEXN-AS1 Gene

No data available for Paralogs for NEXN-AS1 Gene

Variants for NEXN-AS1 Gene

Sequence variations from dbSNP and Humsavar for NEXN-AS1 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs528439602 uncertain-significance, Dilated Cardiomyopathy, Dominant, Hypertrophic cardiomyopathy 77,888,599(-) CGGCGGCGGCGGCGGCGGC/CGGCGGCGGCGGCGGCGGCGGC non_coding_transcript_variant
rs886046528 uncertain-significance, Dilated Cardiomyopathy, Dominant, Hypertrophic cardiomyopathy 77,888,579(-) T/C non_coding_transcript_variant
rs886046529 uncertain-significance, Dilated Cardiomyopathy, Dominant, Hypertrophic cardiomyopathy 77,888,582(-) A/C non_coding_transcript_variant
rs886046532 uncertain-significance, Dilated Cardiomyopathy, Dominant, Hypertrophic cardiomyopathy 77,888,684(-) A/G non_coding_transcript_variant
rs998717379 uncertain-significance, Dilated Cardiomyopathy, Dominant, Hypertrophic cardiomyopathy 77,888,618(-) A/G non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for NEXN-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2329300 CNV deletion 18987734
nsv1137774 CNV deletion 24896259

Additional Variant Information for NEXN-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for NEXN-AS1 Gene

Disorders for NEXN-AS1 Gene

Additional Disease Information for NEXN-AS1

No disorders were found for NEXN-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NEXN-AS1 Gene

Publications for NEXN-AS1 Gene

  1. A Novel Genetic Variant in Long Non-coding RNA Gene NEXN-AS1 is Associated with Risk of Lung Cancer. (PMID: 27713484) Yuan H … Wei Q (Scientific reports 2016) 2 3 58
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4 58

Products for NEXN-AS1 Gene

Sources for NEXN-AS1 Gene

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