NEFMP1 Gene (Pseudogene)

Neurofilament Medium Pseudogene 1

GC10P054598
GIFtS:
4
See more...

Aliases for NEFMP1 Gene

Aliases for NEFMP1 Gene

  • Neurofilament Medium Pseudogene 1 2 3 5
  • Neurofilament, Medium Polypeptide Pseudogene 1 2 3
  • NEFMP1 5

External Ids for NEFMP1 Gene

Previous GeneCards Identifiers for NEFMP1 Gene

  • GC10P056360

Summaries for NEFMP1 Gene

GeneCards Summary for NEFMP1 Gene

NEFMP1 (Neurofilament Medium Pseudogene 1) is a Pseudogene.

Additional gene information for NEFMP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NEFMP1 Gene

Genomics for NEFMP1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for NEFMP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH10J054607 Enhancer 0.3 Ensembl 0.4 +8.0 8023 0.6 POLR2A MIR548F1 RF01061-027 NEFMP1 LOC105378311 MTRNR2L5
GH10J054585 Enhancer 0.3 Ensembl 0.4 -13.9 -13877 0.4 CHD2 NEFMP1 piR-46002-062 LOC105378311
GH10J054587 Enhancer 0.3 Ensembl 0.4 -11.4 -11377 1 JUN NEFMP1 piR-46002-062 LOC105378311
GH10J054606 Enhancer 0.2 Ensembl 0.4 +6.9 6923 0.4 MIR548F1 RF01061-027 NEFMP1 LOC105378311 MTRNR2L5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NEFMP1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for NEFMP1 Gene

Genomic Locations for NEFMP1 Gene
chr10:54,599,678-54,600,880
(GRCh38/hg38)
Size:
1,203 bases
Orientation:
Plus strand
chr10:56,358,706-56,360,443
(GRCh37/hg19)
Size:
1,738 bases
Orientation:
Plus strand

Genomic View for NEFMP1 Gene

Genes around NEFMP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NEFMP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NEFMP1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for NEFMP1 Gene

Proteins for NEFMP1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for NEFMP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NEFMP1 Gene

Domains & Families for NEFMP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NEFMP1 Gene

Function for NEFMP1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NEFMP1 Gene

Localization for NEFMP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NEFMP1 Gene

Pathways & Interactions for NEFMP1 Gene

PathCards logo

SuperPathways for NEFMP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for NEFMP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for NEFMP1 Gene

Drugs & Compounds for NEFMP1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for NEFMP1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for NEFMP1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NEFMP1 Gene

No ASD Table

Relevant External Links for NEFMP1 Gene

GeneLoc Exon Structure for
NEFMP1

Expression for NEFMP1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NEFMP1 Gene

mRNA expression in normal human tissues for NEFMP1 Gene
mRNA expression by GTEx for NEFMP1 Gene
genes like me logo Genes that share expression patterns with NEFMP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NEFMP1 Gene

Orthologs for NEFMP1 Gene

Evolution for NEFMP1 Gene

ENSEMBL:
Gene Tree for NEFMP1 (if available)
TreeFam:
Gene Tree for NEFMP1 (if available)

No data available for Orthologs for NEFMP1 Gene

Paralogs for NEFMP1 Gene

No data available for Paralogs for NEFMP1 Gene

Variants for NEFMP1 Gene

Additional Variant Information for NEFMP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NEFMP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NEFMP1 Gene

Disorders for NEFMP1 Gene

No disorders were found for NEFMP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NEFMP1 Gene

Publications for NEFMP1 Gene

No publications were found for NEFMP1 Gene.

No data available for Mastermind for NEFMP1 Gene

Products for NEFMP1 Gene

Sources for NEFMP1 Gene