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Aliases for NDP-AS1 Gene

Subcategory (RNA class) for NDP-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for NDP-AS1 Gene

  • NDP Antisense RNA 1 2 3 5
  • NDP Antisense RNA 1 (Non-Protein Coding) 2

External Ids for NDP-AS1 Gene

Previous GeneCards Identifiers for NDP-AS1 Gene

  • GC00U933024
  • GC0XP043809

Summaries for NDP-AS1 Gene

GeneCards Summary for NDP-AS1 Gene

NDP-AS1 (NDP Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for NDP-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NDP-AS1 Gene

Genomics for NDP-AS1 Gene

GeneHancer (GH) Regulatory Elements for NDP-AS1 Gene

Promoters and enhancers for NDP-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI044012 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 11.9 +63.0 62991 1.4 JUND POLR2A JUN CEBPB FOSL2 NDP NDP-AS1 LOC643167
GH0XI044011 Enhancer 0.4 FANTOM5 dbSUPER 11.7 +62.0 61978 0.1 NDP NDP-AS1 LOC643167
GH0XI044006 Enhancer 0.2 dbSUPER 11.7 +57.4 57436 1 NDP NDP-AS1 LOC643167
GH0XI043958 Enhancer 0.9 ENCODE dbSUPER 0.4 +8.9 8908 0.2 CTCF ZNF654 NFYA L3MBTL2 TRIM22 MAX REST RAD21 RFX5 ZKSCAN1 NDP-AS1 GC0XP043964 NDP
GH0XI043969 Enhancer 0.6 ENCODE dbSUPER 0.3 +20.4 20448 2.3 JUND ZIC2 TCF7L2 NDP GC0XP043964 NDP-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around NDP-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NDP-AS1 Gene

Genomic Locations for NDP-AS1 Gene
chrX:43,949,732-43,969,620
(GRCh38/hg38)
Size:
19,889 bases
Orientation:
Plus strand
chrX:43,808,978-43,828,866
(GRCh37/hg19)

Genomic View for NDP-AS1 Gene

Genes around NDP-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NDP-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NDP-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for NDP-AS1 Gene

Proteins for NDP-AS1 Gene

Post-translational modifications for NDP-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NDP-AS1 Gene

Domains & Families for NDP-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NDP-AS1 Gene

Function for NDP-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NDP-AS1 Gene

Localization for NDP-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NDP-AS1 Gene

Pathways & Interactions for NDP-AS1 Gene

SuperPathways for NDP-AS1 Gene

No Data Available

Interacting Proteins for NDP-AS1 Gene

Gene Ontology (GO) - Biological Process for NDP-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NDP-AS1 Gene

Drugs & Compounds for NDP-AS1 Gene

No Compound Related Data Available

Transcripts for NDP-AS1 Gene

mRNA/cDNA for NDP-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for NDP-AS1 Gene

No ASD Table

Relevant External Links for NDP-AS1 Gene

GeneLoc Exon Structure for
NDP-AS1
ECgene alternative splicing isoforms for
NDP-AS1

Expression for NDP-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NDP-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for NDP-AS1 Gene

This gene is overexpressed in Brain - Caudate (basal ganglia) (x4.5), Brain - Amygdala (x4.4), Brain - Nucleus accumbens (basal ganglia) (x4.3), and Ovary (x4.1).
genes like me logo Genes that share expression patterns with NDP-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NDP-AS1 Gene

Orthologs for NDP-AS1 Gene

Evolution for NDP-AS1 Gene

ENSEMBL:
Gene Tree for NDP-AS1 (if available)
TreeFam:
Gene Tree for NDP-AS1 (if available)

No data available for Orthologs for NDP-AS1 Gene

Paralogs for NDP-AS1 Gene

No data available for Paralogs for NDP-AS1 Gene

Variants for NDP-AS1 Gene

Additional Variant Information for NDP-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NDP-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NDP-AS1 Gene

Disorders for NDP-AS1 Gene

Additional Disease Information for NDP-AS1

No disorders were found for NDP-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NDP-AS1 Gene

Publications for NDP-AS1 Gene

No publications were found for NDP-AS1 Gene.

Products for NDP-AS1 Gene

Sources for NDP-AS1 Gene

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