NCOA4P2 Gene (Pseudogene)

Nuclear Receptor Coactivator 4 Pseudogene 2

GC04M088508
GIFtS:
5
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Aliases for NCOA4P2 Gene

Aliases for NCOA4P2 Gene

  • Nuclear Receptor Coactivator 4 Pseudogene 2 2 3 5
  • NCOA4P2 5

External Ids for NCOA4P2 Gene

Summaries for NCOA4P2 Gene

GeneCards Summary for NCOA4P2 Gene

NCOA4P2 (Nuclear Receptor Coactivator 4 Pseudogene 2) is a Pseudogene.

Additional gene information for NCOA4P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NCOA4P2 Gene

Genomics for NCOA4P2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for NCOA4P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH04J088508 Enhancer 0.3 Ensembl 600.7 +1.8 1786 0.2 TBX21 NCOA4P2 piR-34300 piR-43967 piR-60300 ABCG2 lnc-HERC5-3 PIGY PYURF HERC5
GH04J088522 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 -12.8 -12792 3 SP1 GATAD2A HNRNPL TFE3 IKZF1 NFKBIZ ZNF692 POLR2A ZNF7 BACH1 ENSG00000287542 HERC3 PYURF PIGY PIGY-DT NCOA4P2 lnc-HERC5-3 HERC5
GH04J088516 Enhancer 0.8 Ensembl 0.7 -4.6 -4614 0.2 CEBPG GATAD2A REST SOX13 NFKBIZ RCOR2 FOXA1 RXRB SP1 CEBPA NCOA4P2 PYURF PIGY lnc-HERC5-3 HERC5
GH04J088515 Enhancer 0.9 Ensembl ENCODE 0.4 -5.3 -5310 0.5 GATAD2A CTCF ZNF143 REST RAD21 TRIM22 ZNF600 IRF3 YBX1 RUNX3 NCOA4P2 PYURF PIGY lnc-HERC5-3 HERC5
GH04J088518 Enhancer 0.6 Ensembl 0.4 -7.6 -7614 0.2 DPF2 NFE2 ZNF316 MAFG BCOR MAFK NR2F1 NR2F6 MAFF BACH1 NCOA4P2 PYURF PIGY lnc-HERC5-3 HERC5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NCOA4P2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for NCOA4P2 Gene

Genomic Locations for NCOA4P2 Gene
chr4:88,507,003-88,510,487
(GRCh38/hg38)
Size:
3,485 bases
Orientation:
Minus strand
chr4:89,428,154-89,431,638
(GRCh37/hg19)
Size:
3,485 bases
Orientation:
Minus strand

Genomic View for NCOA4P2 Gene

Genes around NCOA4P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NCOA4P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NCOA4P2 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for NCOA4P2 Gene

Proteins for NCOA4P2 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for NCOA4P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NCOA4P2 Gene

Domains & Families for NCOA4P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NCOA4P2 Gene

Function for NCOA4P2 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NCOA4P2 Gene

Localization for NCOA4P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NCOA4P2 Gene

Pathways & Interactions for NCOA4P2 Gene

PathCards logo

SuperPathways for NCOA4P2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for NCOA4P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for NCOA4P2 Gene

Drugs & Compounds for NCOA4P2 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for NCOA4P2 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for NCOA4P2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NCOA4P2 Gene

No ASD Table

Relevant External Links for NCOA4P2 Gene

GeneLoc Exon Structure for
NCOA4P2

Expression for NCOA4P2 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NCOA4P2 Gene

Orthologs for NCOA4P2 Gene

Evolution for NCOA4P2 Gene

ENSEMBL:
Gene Tree for NCOA4P2 (if available)
TreeFam:
Gene Tree for NCOA4P2 (if available)

No data available for Orthologs for NCOA4P2 Gene

Paralogs for NCOA4P2 Gene

No data available for Paralogs for NCOA4P2 Gene

Variants for NCOA4P2 Gene

Additional Variant Information for NCOA4P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NCOA4P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NCOA4P2 Gene

Disorders for NCOA4P2 Gene

No disorders were found for NCOA4P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NCOA4P2 Gene

Publications for NCOA4P2 Gene

  1. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3

No data available for Mastermind for NCOA4P2 Gene

Products for NCOA4P2 Gene

Sources for NCOA4P2 Gene