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Aliases for NCBP2AS2 Gene
Aliases for NCBP2AS2 Gene
External Ids for NCBP2AS2 Gene
- HGNC: 25121
- Entrez Gene: 152217
- Ensembl: ENSG00000270170
- UniProtKB: Q69YL0
Previous HGNC Symbols for NCBP2AS2 Gene
- NCBP2-AS2
Summaries for NCBP2AS2 Gene
GeneCards Summary for NCBP2AS2 Gene
NCBP2AS2 (NCBP2 Antisense 2 (Head To Head)) is a Protein Coding gene.
Additional gene information for NCBP2AS2 Gene
- HGNC(25121)
- Entrez Gene(152217)
- Ensembl(ENSG00000270170)
- UniProtKB(Q69YL0)
- Open Targets Platform(ENSG00000270170)
- Search for NCBP2AS2 at DataMed
- Search for NCBP2AS2 at HumanCyc
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NCBP2AS2 Gene
Genomics for NCBP2AS2 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for NCBP2AS2 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around NCBP2AS2 on the GeneHancer Hub at the UCSC Golden Path
Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for NCBP2AS2
Genomic Locations for NCBP2AS2 Gene
Genomic Locations for NCBP2AS2 Gene
- chr3:196,942,674-196,943,543
- (GRCh38/hg38)
- Size:
- 870 bases
- Orientation:
- Plus strand
- chr3:196,669,494-196,670,884
- (GRCh37/hg19)
- Size:
- 1,391 bases
- Orientation:
- Plus strand
Genomic View for NCBP2AS2 Gene
Genes around NCBP2AS2 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 3q29 by HGNC
- 3q29 by Entrez Gene
- 3q29 by Ensembl
NCBP2AS2 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for NCBP2AS2 Gene
Proteins for NCBP2AS2 Gene
-
Protein details for NCBP2AS2 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q69YL0-NCAS2_HUMAN
- Recommended name:
- Protein NCBP2AS2
- Protein Accession:
- Q69YL0
Protein attributes for NCBP2AS2 Gene
- Size:
- 99 amino acids
- Molecular mass:
- 10891 Da
- Quaternary structure:
- No Data Available
- Miscellaneous:
-
- Induced by hypoxia in cancer-associated fibroblasts and promotes tumor angiogenesis by causing increased secretion of VEGFA which leads to endothelial sprouting.
Post-translational modifications for NCBP2AS2 Gene
No Post-translational modifications
Other Protein References for NCBP2AS2 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for NCBP2AS2
- Origene Custom Protein Services for NCBP2AS2
No data available for DME Specific Peptides for NCBP2AS2 Gene
Domains & Families for NCBP2AS2 Gene
Gene Families for NCBP2AS2 Gene
- Human Protein Atlas (HPA):
-
- Predicted intracellular proteins
No data available for Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NCBP2AS2 Gene
Function for NCBP2AS2 Gene
Phenotypes From GWAS Catalog for NCBP2AS2 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for NCBP2AS2 - Select products 50% OFF >
- * NCBP2AS2 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
OriGene CRISPR knockouts for NCBP2AS2
miRNA Products
Inhibitory RNA Products
- Origene shrna and RNAi products in human, mouse, rat for NCBP2AS2
- Browse OriGene Inhibitory RNA Products For NCBP2AS2
Clone Products
- Applied Biological Materials (abm): Clones for NCBP2AS2 - Select products 50% OFF >
- * NCBP2AS2 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NCBP2AS2 Gene
Localization for NCBP2AS2 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NCBP2AS2 Gene
Transcripts for NCBP2AS2 Gene
mRNA/cDNA for NCBP2AS2 Gene
- 1 REFSEQ mRNAs :
- 6 NCBI additional mRNA sequence :
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000602845 870 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for NCBP2AS2 - Select products 50% OFF >
- * NCBP2AS2 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
OriGene CRISPR knockouts for NCBP2AS2
miRNA Products
Inhibitory RNA Products
- Origene shrna and RNAi products in human, mouse, rat for NCBP2AS2
- Browse OriGene Inhibitory RNA Products For NCBP2AS2
Clone Products
- Applied Biological Materials (abm): Clones for NCBP2AS2 - Select products 50% OFF >
- * NCBP2AS2 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
Relevant External Links for NCBP2AS2 Gene
- GeneLoc Exon Structure for
- NCBP2AS2
Expression for NCBP2AS2 Gene
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for NCBP2AS2
No Expression Related Data Available
Primer Products
-
OriGene qPCR primer pairs for NCBP2AS2
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NCBP2AS2 Gene
Orthologs for NCBP2AS2 Gene
Evolution for NCBP2AS2 Gene
- ENSEMBL:
- Gene Tree for NCBP2AS2 (if available)
- TreeFam:
- Gene Tree for NCBP2AS2 (if available)
- Aminode:
- Evolutionary constrained regions (ECRs) for NCBP2AS2: view image
No data available for Orthologs for NCBP2AS2 Gene
Paralogs for NCBP2AS2 Gene
No data available for Paralogs for NCBP2AS2 Gene
Variants for NCBP2AS2 Gene
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| esv2763775 | CNV | gain+loss | 21179565 |
| esv3599293 | CNV | gain | 21293372 |
| nsv1003135 | CNV | gain | 25217958 |
| nsv593086 | CNV | loss | 21841781 |
Additional Variant Information for NCBP2AS2 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- NCBP2AS2
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for NCBP2AS2 Gene
Disorders for NCBP2AS2 Gene
Additional Disease Information for NCBP2AS2
No disorders were found for NCBP2AS2 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NCBP2AS2 Gene
Publications for NCBP2AS2 Gene
- Hypoxic cancer-associated fibroblasts increase NCBP2-AS2/HIAR to promote endothelial sprouting through enhanced VEGF signaling. (PMID: 30723174) Kugeratski FG … Zanivan S (Science signaling 2019) 2 3 4
- Ribosome profiling analysis identified a KRAS-interacting microprotein that represses oncogenic signaling in hepatocellular carcinoma cells. (PMID: 31240521) Xu W … Qu L (Science China. Life sciences 2020) 2 3
- A reference map of the human binary protein interactome. (PMID: 32296183) Luck K … Calderwood MA (Nature 2020) 3
- H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids. (PMID: 30804502) Nakamura K … Groth A (Nature cell biology 2019) 3
- N-terminome analysis of the human mitochondrial proteome. (PMID: 25944712) Vaca Jacome AS … Carapito C (Proteomics 2015) 4
ExternalLinks
Products for NCBP2AS2 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for NCBP2AS2
- Origene Custom Protein Services for NCBP2AS2
- Origene shrna and RNAi products in human, mouse, rat for NCBP2AS2
- Browse OriGene Inhibitory RNA Products For NCBP2AS2
- OriGene qPCR primer pairs for NCBP2AS2
- OriGene CRISPR knockouts for NCBP2AS2
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For NCBP2AS2
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- VectorBuilder Custom and pre-made DNA vectors for NCBP2AS2 (ie. gene expression, shRNA knockdown, CRISPR)
- VectorBuilder Viral vectors for NCBP2AS2 (ie. lentivirus, AAV, adenovirus)
- VectorBuilder CRISPR vectors for NCBP2AS2 (ie. knockout, knockin, CRISPRa, CRISPRi)
- VectorBuilder Virus packaging for NCBP2AS2 CRISPR vectors (ie. lentivirus, AAV, adenovirus)
- VectorBuilder Stable cell line generation for NCBP2AS2
- antibodies-online: Search results for available NCBP2-AS2 related products ranked by validation data
- antibodies-online: Search results for available NCBP2-AS2 related products ranked by validation data
- antibodies-online: Search results for available NCBP2-AS2 related products ranked by validation data
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for NCBP2AS2
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for NCBP2AS2
- Search GeneCopoeia for miRNA 3'UTR Target clone products for NCBP2AS2
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for NCBP2AS2
Sources for NCBP2AS2 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB