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Aliases for NASPP1 Gene

Aliases for NASPP1 Gene

  • Nuclear Autoantigenic Sperm Protein Pseudogene 1 2 3
  • AC022182.3 5

External Ids for NASPP1 Gene

Previous GeneCards Identifiers for NASPP1 Gene

  • GC08M061899
  • GC08M062012
  • GC08M061849

Summaries for NASPP1 Gene

GeneCards Summary for NASPP1 Gene

NASPP1 (Nuclear Autoantigenic Sperm Protein Pseudogene 1) is a Pseudogene.

Additional gene information for NASPP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NASPP1 Gene

Genomics for NASPP1 Gene

GeneHancer (GH) Regulatory Elements for NASPP1 Gene

Promoters and enhancers for NASPP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I060939 Enhancer 0.5 Ensembl dbSUPER 550.8 +0.9 877 0.2 ZNF680 NASPP1 LOC105375938 ENSG00000254777
GH08I060938 Enhancer 0.5 FANTOM5 dbSUPER 550.8 +1.6 1553 0.4 NASPP1 LOC105375938 ENSG00000254777
GH08I060940 Enhancer 0.4 dbSUPER 550.8 +0.1 132 0.8 ZNF680 ZNF207 NASPP1 LOC105375938 ENSG00000254777
GH08I060942 Enhancer 1 ENCODE dbSUPER 5.5 -4.6 -4554 3.5 HDGF ELF3 ARID4B ZSCAN9 RAD21 RARA YY1 MIXL1 HMG20B MCM3 NPM1P6 CLVS1 NASPP1 ENSG00000254777
GH08I060908 Promoter/Enhancer 2.2 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +26.7 26716 10.3 HDGF PKNOX1 SMAD1 FEZF1 IRF4 ZNF766 ZNF207 ZNF143 FOS SP3 CHD7 ENSG00000254432 CLVS1 RAB2A ENSG00000254777 LOC105375938 NASPP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around NASPP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NASPP1 Gene

Genomic Locations for NASPP1 Gene
chr8:60,936,948-60,939,978
(GRCh38/hg38)
Size:
3,031 bases
Orientation:
Minus strand
chr8:61,849,507-61,852,525
(GRCh37/hg19)

Genomic View for NASPP1 Gene

Genes around NASPP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NASPP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NASPP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NASPP1 Gene

Proteins for NASPP1 Gene

Post-translational modifications for NASPP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NASPP1 Gene

Domains & Families for NASPP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NASPP1 Gene

Function for NASPP1 Gene

Phenotypes From GWAS Catalog for NASPP1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NASPP1 Gene

Localization for NASPP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NASPP1 Gene

Pathways & Interactions for NASPP1 Gene

SuperPathways for NASPP1 Gene

No Data Available

Interacting Proteins for NASPP1 Gene

Gene Ontology (GO) - Biological Process for NASPP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NASPP1 Gene

Drugs & Compounds for NASPP1 Gene

No Compound Related Data Available

Transcripts for NASPP1 Gene

mRNA/cDNA for NASPP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for NASPP1 Gene

No ASD Table

Relevant External Links for NASPP1 Gene

GeneLoc Exon Structure for
NASPP1
ECgene alternative splicing isoforms for
NASPP1

Expression for NASPP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NASPP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of NASPP1 Gene:

NASPP1
genes like me logo Genes that share expression patterns with NASPP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NASPP1 Gene

Orthologs for NASPP1 Gene

Evolution for NASPP1 Gene

ENSEMBL:
Gene Tree for NASPP1 (if available)
TreeFam:
Gene Tree for NASPP1 (if available)

No data available for Orthologs for NASPP1 Gene

Paralogs for NASPP1 Gene

No data available for Paralogs for NASPP1 Gene

Variants for NASPP1 Gene

Additional Variant Information for NASPP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NASPP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NASPP1 Gene

Disorders for NASPP1 Gene

Additional Disease Information for NASPP1

Genetic Association Database
(GAD)

No disorders were found for NASPP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NASPP1 Gene

Publications for NASPP1 Gene

  1. Comparison of mouse and human NASP genes and expression in human transformed and tumor cell lines. (PMID: 11674998) Richardson RT … O'Rand MG (Gene 2001) 2 3 58
  2. Genome-wide association study of lung function decline in adults with and without asthma. (PMID: 22424883) Imboden M … Probst-Hensch NM (The Journal of allergy and clinical immunology 2012) 44 58
  3. Genome-wide genotyping in Parkinson's disease and neurologically normal controls: first stage analysis and public release of data. (PMID: 17052657) Fung HC … Singleton A (The Lancet. Neurology 2006) 44 58

Products for NASPP1 Gene

Sources for NASPP1 Gene

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