Aliases for NASPP1 Gene

Aliases for NASPP1 Gene

  • Nuclear Autoantigenic Sperm Protein Pseudogene 1 2 3
  • Nuclear Autoantigenic Sperm Protein (Histone-Binding) Pseudogene 3

External Ids for NASPP1 Gene

Previous GeneCards Identifiers for NASPP1 Gene

  • GC08M061899
  • GC08M062012
  • GC08M061849

Summaries for NASPP1 Gene

GeneCards Summary for NASPP1 Gene

NASPP1 (Nuclear Autoantigenic Sperm Protein Pseudogene 1) is a Pseudogene.

Additional gene information for NASPP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NASPP1 Gene

Genomics for NASPP1 Gene

GeneHancer (GH) Regulatory Elements for NASPP1 Gene

Promoters and enhancers for NASPP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J060938 Enhancer 0.8 FANTOM5 Ensembl dbSUPER 500.7 +1.0 977 3.2 ZNF207 ZNF680 ENSG00000255397 NASPP1 ENSG00000254777 LOC105375938
GH08J060942 Enhancer 1 ENCODE dbSUPER 0.7 -4.6 -4554 3.5 TCF7 TSC22D4 TEAD1 ZBTB26 MCM3 ZSCAN9 CEBPB MAFF GATA3 SAP130 NPM1P6 CLVS1 ENSG00000255397 NASPP1 piR-50437-635 ENSG00000254777
GH08J060947 Enhancer 1.3 ENCODE CraniofacialAtlas dbSUPER 0.4 -10.8 -10767 5.9 NRF1 SP1 JUND FOS TEAD4 EP300 TCF7 HES1 MEF2C RUNX1 NASPP1 piR-50437-635 ENSG00000254777
GH08J060960 Enhancer 1.2 Ensembl ENCODE CraniofacialAtlas 0.4 -21.6 -21629 2 KDM6A TRIM28 TGIF2 TEAD1 ATF2 FOXA2 SIN3A CREB1 USF1 SAP130 piR-50437-635 NASPP1 ENSG00000254777
GH08J060963 Enhancer 0.4 ENCODE CraniofacialAtlas 0.4 -23.9 -23893 1.3 IKZF1 piR-50437-635 NASPP1 ENSG00000254777
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NASPP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NASPP1 Gene

Genomic Locations for NASPP1 Gene
chr8:60,936,948-60,939,978
(GRCh38/hg38)
Size:
3,031 bases
Orientation:
Minus strand
chr8:61,849,507-61,852,525
(GRCh37/hg19)
Size:
3,019 bases
Orientation:
Minus strand

Genomic View for NASPP1 Gene

Genes around NASPP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NASPP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NASPP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NASPP1 Gene

Proteins for NASPP1 Gene

Post-translational modifications for NASPP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NASPP1 Gene

Domains & Families for NASPP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NASPP1 Gene

Function for NASPP1 Gene

Phenotypes From GWAS Catalog for NASPP1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NASPP1 Gene

Localization for NASPP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NASPP1 Gene

Pathways & Interactions for NASPP1 Gene

PathCards logo

SuperPathways for NASPP1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for NASPP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for NASPP1 Gene

Drugs & Compounds for NASPP1 Gene

No Compound Related Data Available

Transcripts for NASPP1 Gene

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for NASPP1 Gene

No ASD Table

Relevant External Links for NASPP1 Gene

GeneLoc Exon Structure for
NASPP1

No data available for mRNA/cDNA for NASPP1 Gene

Expression for NASPP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NASPP1 Gene

genes like me logo Genes that share expression patterns with NASPP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NASPP1 Gene

Orthologs for NASPP1 Gene

No data available for Orthologs and Evolution for NASPP1 Gene

Paralogs for NASPP1 Gene

No data available for Paralogs for NASPP1 Gene

Variants for NASPP1 Gene

Additional Variant Information for NASPP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NASPP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NASPP1 Gene

Disorders for NASPP1 Gene

Additional Disease Information for NASPP1

Genetic Association Database
(GAD)

No disorders were found for NASPP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NASPP1 Gene

Publications for NASPP1 Gene

  1. Comparison of mouse and human NASP genes and expression in human transformed and tumor cell lines. (PMID: 11674998) Richardson RT … O'Rand MG (Gene 2001) 2 3 54
  2. Genome-wide association study of lung function decline in adults with and without asthma. (PMID: 22424883) Imboden M … Probst-Hensch NM (The Journal of allergy and clinical immunology 2012) 41 54
  3. Genome-wide genotyping in Parkinson's disease and neurologically normal controls: first stage analysis and public release of data. (PMID: 17052657) Fung HC … Singleton A (The Lancet. Neurology 2006) 41 54

No data available for Mastermind for NASPP1 Gene

Products for NASPP1 Gene

Sources for NASPP1 Gene