Aliases for NAPA-AS1 Gene

Subcategory (RNA class) for NAPA-AS1 Gene


Number of RNA Genes sources:

3 / 17

Aliases for NAPA-AS1 Gene

  • NAPA Antisense RNA 1 2 3 5
  • NAPA Antisense RNA 1 (Non-Protein Coding) 2 3
  • NAPA-AS1 2 5
  • NONHSAG026122.2 91
  • HSALNG0126777 164
  • Lnc-DHX34-4 165

External Ids for NAPA-AS1 Gene

Previous GeneCards Identifiers for NAPA-AS1 Gene

  • GC19P047989

Summaries for NAPA-AS1 Gene

GeneCards Summary for NAPA-AS1 Gene

NAPA-AS1 (NAPA Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for NAPA-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for NAPA-AS1 Gene

Genomics for NAPA-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for NAPA-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J047483 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 +0.3 277 2.7 SP1 HNRNPL CREB1 CTCF TEAD4 PRDM10 REST ZNF629 TFE3 SIX5 KPTN NAPA-AS1 lnc-KPTN-1 ZC3H4 GRWD1 KDELR1 BICRA NOP53 NOP53-AS1 ENSG00000268746
GH19J047261 Enhancer 0.3 dbSUPER 10 -223.0 -223023 0.4 ATM RF00017-3032 CCDC9 ENSG00000268810 NAPA-AS1 piR-53036 INAFM1 lnc-C5AR1-3
GH19J047486 Enhancer 0.7 ENCODE dbSUPER 0.7 +3.3 3281 1.8 POLR2A MNT RUNX3 TCF12 ZFHX2 EBF1 MYC MAX EGR2 KPTN ENSG00000279861 lnc-KPTN-1 NAPA-AS1 NAPA
GH19J047496 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +13.3 13323 2 JUND MTA2 ZIC2 PKNOX1 NR2C1 DPF2 HDAC1 TCF12 EP300 TARDBP lnc-KPTN-2 MEIS3 ZNF541 BICRA TMEM143 KPTN NAPA-AS1 NAPA lnc-BICRA-4 lnc-ZNF541-2
GH19J047479 Enhancer 0.6 ENCODE 0.7 -4.1 -4060 0.2 PKNOX1 HDAC1 MGA NKRF USF1 MNT YY1 MYC MBD2 KLF8 NAPA-AS1 lnc-SLC8A2-1 KPTN SLC8A2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NAPA-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for NAPA-AS1 Gene

Genomic Locations for NAPA-AS1 Gene
17,329 bases
Plus strand
17,316 bases
Plus strand

Genomic View for NAPA-AS1 Gene

Genes around NAPA-AS1 on UCSC Golden Path with GeneCards custom track
NAPA-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
NAPA-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NAPA-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NAPA-AS1 Gene

Proteins for NAPA-AS1 Gene

Post-translational modifications for NAPA-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NAPA-AS1 Gene

Domains & Families for NAPA-AS1 Gene

Gene Families for NAPA-AS1 Gene

genes like me logo Genes that share domains with NAPA-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for NAPA-AS1 Gene

Function for NAPA-AS1 Gene

Phenotypes From GWAS Catalog for NAPA-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NAPA-AS1 Gene

Localization for NAPA-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NAPA-AS1 Gene

Pathways & Interactions for NAPA-AS1 Gene

PathCards logo

SuperPathways for NAPA-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for NAPA-AS1 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for NAPA-AS1 Gene

Drugs & Compounds for NAPA-AS1 Gene

No Compound Related Data Available

Transcripts for NAPA-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for NAPA-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075DEA4_9606 lncRNA 656 4

HGNC: 44118,

RefSeq: NR_038452,

LncBook: HSALNT0260991,


URS000029BFBD_9606 lncRNA 1753 3

Ensembl: ENST00000593284 (view in UCSC) ,

LncBook: HSALNT0260990,


URS000008DB86_9606 lncRNA 630 2

Ensembl: ENST00000594367 (view in UCSC) ,

LncBook: HSALNT0260997,

URS00008BEEC6_9606 lncRNA 3365 2

LNCipedia: lnc-DHX34-4:1,


URS00008C1CC8_9606 lncRNA 1675 1


NAPA-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for NAPA-AS1 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for NAPA-AS1 Gene

No ASD Table

Relevant External Links for NAPA-AS1 Gene

GeneLoc Exon Structure for

Expression for NAPA-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NAPA-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for NAPA-AS1

SOURCE GeneReport for Unigene cluster for NAPA-AS1 Gene:

genes like me logo Genes that share expression patterns with NAPA-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NAPA-AS1 Gene

Orthologs for NAPA-AS1 Gene

Evolution for NAPA-AS1 Gene

Gene Tree for NAPA-AS1 (if available)
Gene Tree for NAPA-AS1 (if available)

No data available for Orthologs for NAPA-AS1 Gene

Paralogs for NAPA-AS1 Gene

No data available for Paralogs for NAPA-AS1 Gene

Variants for NAPA-AS1 Gene

Additional dbSNP identifiers (rs#s) for NAPA-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for NAPA-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2131971 CNV deletion 18987734
esv2718664 CNV deletion 23290073
esv2718665 CNV deletion 23290073
esv2758765 CNV loss 17122850
esv3346749 CNV duplication 20981092
esv3556493 CNV deletion 23714750
nsv1056887 CNV gain 25217958
nsv1116643 CNV deletion 24896259
nsv138407 CNV deletion 16902084
nsv428366 CNV loss 18775914
nsv579888 CNV gain 21841781
nsv953591 CNV deletion 24416366

Additional Variant Information for NAPA-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for NAPA-AS1 Gene

Disorders for NAPA-AS1 Gene

Additional Disease Information for NAPA-AS1

No disorders were found for NAPA-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NAPA-AS1 Gene

Publications for NAPA-AS1 Gene

No publications were found for NAPA-AS1 Gene.

Products for NAPA-AS1 Gene

Sources for NAPA-AS1 Gene