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Aliases for NANOGP6 Gene

Subcategory (RNA class) for NANOGP6 Gene

antisense

Aliases for NANOGP6 Gene

  • Nanog Homeobox Pseudogene 6 2 3 5
  • NANOG Pseudogene 6 3

External Ids for NANOGP6 Gene

ORGUL Members for NANOGP6 Gene

Previous GeneCards Identifiers for NANOGP6 Gene

  • GC10U900445
  • GC10M101538

Summaries for NANOGP6 Gene

GeneCards Summary for NANOGP6 Gene

NANOGP6 (Nanog Homeobox Pseudogene 6) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for NANOGP6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NANOGP6 Gene

Genomics for NANOGP6 Gene

GeneHancer (GH) Regulatory Elements for NANOGP6 Gene

Promoters and enhancers for NANOGP6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J099788 Promoter/Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 600.7 +0.6 611 1.3 SP1 RXRA CEBPB JUND ATF3 YY1 ZBTB33 GABPA RAD21 HNF4A NANOGP6 CWF19L1 ABCC2
GH10J099845 Promoter/Enhancer 1.4 Ensembl ENCODE 11.2 -56.7 -56709 1.4 CTCF CEBPG ZSCAN21 SP7 RAD21 CREB1 RELA CEBPA ATF1 ZNF143 DNMBP-AS1 NANOGP6 ABCC2 DNMBP EBAG9P1 GC10P099874
GH10J099944 Enhancer 1 Ensembl ENCODE dbSUPER 10.1 -156.1 -156091 3 SP1 RFX1 JUND FOS ATF3 FOSL2 HNF4A JUN HNF4G NFATC1 DNMBP NANOGP6 ABCC2 DNMBP-AS1
GH10J099833 Enhancer 0.8 Ensembl ENCODE 11.1 -45.2 -45182 1.7 POLR2A MAFK NFE2L2 SP1 NFE2 FOS MAFG FOSL1 FOSL2 SIN3A NANOGP6 ABCC2 DNMBP DNMBP-AS1 GC10P099874
GH10J099755 Promoter/Enhancer 0.7 EPDnew Ensembl 12.9 +33.7 33713 0.6 ABCC2 NANOGP6 EBAG9P1 GC10P099758 PIR37309 GC10P099739 CUTC
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around NANOGP6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NANOGP6 Gene

Genomic Locations for NANOGP6 Gene
chr10:99,788,474-99,789,414
(GRCh38/hg38)
Size:
941 bases
Orientation:
Minus strand
chr10:101,548,231-101,549,171
(GRCh37/hg19)
Size:
941 bases
Orientation:
Minus strand

Genomic View for NANOGP6 Gene

Genes around NANOGP6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NANOGP6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NANOGP6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NANOGP6 Gene

Proteins for NANOGP6 Gene

Post-translational modifications for NANOGP6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NANOGP6 Gene

Domains & Families for NANOGP6 Gene

Gene Families for NANOGP6 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with NANOGP6: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NANOGP6 Gene

Function for NANOGP6 Gene

Phenotypes From GWAS Catalog for NANOGP6 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NANOGP6 Gene

Localization for NANOGP6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NANOGP6 Gene

Pathways & Interactions for NANOGP6 Gene

PathCards logo

SuperPathways for NANOGP6 Gene

No Data Available

Interacting Proteins for NANOGP6 Gene

Gene Ontology (GO) - Biological Process for NANOGP6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NANOGP6 Gene

Drugs & Compounds for NANOGP6 Gene

No Compound Related Data Available

Transcripts for NANOGP6 Gene

mRNA/cDNA for NANOGP6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for NANOGP6 Gene

No ASD Table

Relevant External Links for NANOGP6 Gene

GeneLoc Exon Structure for
NANOGP6
ECgene alternative splicing isoforms for
NANOGP6

Expression for NANOGP6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NANOGP6 Gene

NURSA nuclear receptor signaling pathways regulating expression of NANOGP6 Gene:

NANOGP6
genes like me logo Genes that share expression patterns with NANOGP6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NANOGP6 Gene

Orthologs for NANOGP6 Gene

Evolution for NANOGP6 Gene

ENSEMBL:
Gene Tree for NANOGP6 (if available)
TreeFam:
Gene Tree for NANOGP6 (if available)

No data available for Orthologs for NANOGP6 Gene

Paralogs for NANOGP6 Gene

No data available for Paralogs for NANOGP6 Gene

Variants for NANOGP6 Gene

Additional Variant Information for NANOGP6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NANOGP6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NANOGP6 Gene

Disorders for NANOGP6 Gene

No disorders were found for NANOGP6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NANOGP6 Gene

Publications for NANOGP6 Gene

  1. Eleven daughters of NANOG. (PMID: 15233988) Booth HA … Holland PW (Genomics 2004) 2 3 58

Products for NANOGP6 Gene

Sources for NANOGP6 Gene

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