Aliases for MZF1-AS1 Gene

Subcategory (RNA class) for MZF1-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for MZF1-AS1 Gene

  • MZF1 Antisense RNA 1 2 3 5
  • NONHSAG026743 92
  • HSALNG0127993 167
  • HSALNG0127994 167
  • Lnc-TRIM28-14 168
  • MZF1-AS1 2

External Ids for MZF1-AS1 Gene

Previous GeneCards Identifiers for MZF1-AS1 Gene

  • GC19P058564
  • GC19P058706
  • GC19P058742
  • GC19P058749
  • GC19P058580
  • GC19P058683

Summaries for MZF1-AS1 Gene

GeneCards Summary for MZF1-AS1 Gene

MZF1-AS1 (MZF1 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with MZF1-AS1 include Perlman Syndrome.

Additional gene information for MZF1-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MZF1-AS1 Gene

Genomics for MZF1-AS1 Gene

GeneHancer (GH) Regulatory Elements for MZF1-AS1 Gene

Promoters and enhancers for MZF1-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MZF1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MZF1-AS1 Gene

Genomic Locations for MZF1-AS1 Gene
chr19:58,559,127-58,582,100
(GRCh38/hg38)
Size:
22,974 bases
Orientation:
Plus strand
chr19:59,070,496-59,086,164
(GRCh37/hg19)
Size:
15,669 bases
Orientation:
Plus strand

Genomic View for MZF1-AS1 Gene

Genes around MZF1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MZF1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MZF1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MZF1-AS1 Gene

Proteins for MZF1-AS1 Gene

Post-translational modifications for MZF1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MZF1-AS1 Gene

Domains & Families for MZF1-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MZF1-AS1 Gene

Function for MZF1-AS1 Gene

Phenotypes From GWAS Catalog for MZF1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MZF1-AS1 Gene

Localization for MZF1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MZF1-AS1 Gene

Pathways & Interactions for MZF1-AS1 Gene

PathCards logo

SuperPathways for MZF1-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for MZF1-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MZF1-AS1 Gene

Drugs & Compounds for MZF1-AS1 Gene

No Compound Related Data Available

Transcripts for MZF1-AS1 Gene

mRNA/cDNA for MZF1-AS1 Gene

11 RNACentral transcripts :
1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :
5 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
4 NONCODE transcripts :
2 LncBook transcripts :
4 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for MZF1-AS1 Gene

No ASD Table

Relevant External Links for MZF1-AS1 Gene

GeneLoc Exon Structure for
MZF1-AS1

Expression for MZF1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MZF1-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for MZF1-AS1

genes like me logo Genes that share expression patterns with MZF1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MZF1-AS1 Gene

Orthologs for MZF1-AS1 Gene

Evolution for MZF1-AS1 Gene

ENSEMBL:
Gene Tree for MZF1-AS1 (if available)
TreeFam:
Gene Tree for MZF1-AS1 (if available)

No data available for Orthologs for MZF1-AS1 Gene

Paralogs for MZF1-AS1 Gene

No data available for Paralogs for MZF1-AS1 Gene

Variants for MZF1-AS1 Gene

Additional dbSNP identifiers (rs#s) for MZF1-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for MZF1-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv3687n100 CNV gain 25217958
dgv3688n100 CNV gain 25217958
nsv1057077 CNV gain 25217958
nsv1057206 CNV gain 25217958
nsv1114041 CNV deletion 24896259
nsv1160670 CNV deletion 26073780
nsv515731 CNV gain+loss 19592680
nsv828657 CNV gain 20364138
nsv952156 CNV deletion 24416366

Additional Variant Information for MZF1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MZF1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for MZF1-AS1 Gene

Disorders for MZF1-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for MZF1-AS1 Gene - From: DISEASES

Disorder Aliases PubMed IDs
perlman syndrome
  • nephroblastoma
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for MZF1-AS1

genes like me logo Genes that share disorders with MZF1-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for MZF1-AS1 Gene

Publications for MZF1-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 54
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

Products for MZF1-AS1 Gene

Sources for MZF1-AS1 Gene