Aliases for MYOSLID Gene

Subcategory (RNA class) for MYOSLID Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for MYOSLID Gene

  • Myocardin-Induced Smooth Muscle LncRNA, Inducer Of Differentiation 2 3 5
  • MYOSLID 2 168
  • HSALNG0021858 167
  • NONHSAG030360 92

External Ids for MYOSLID Gene

Previous GeneCards Identifiers for MYOSLID Gene

  • GC02P207240
  • GC02P207168

Summaries for MYOSLID Gene

GeneCards Summary for MYOSLID Gene

MYOSLID (Myocardin-Induced Smooth Muscle LncRNA, Inducer Of Differentiation) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for MYOSLID Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MYOSLID Gene

Genomics for MYOSLID Gene

GeneHancer (GH) Regulatory Elements for MYOSLID Gene

Promoters and enhancers for MYOSLID Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J207161 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 -1.9 -1863 7.7 EP300 FOXK2 ZNF217 SIN3A NRF1 TCF12 USF1 POLR2G SP1 NCOR1 KLF7 MYOSLID lnc-MDH1B-8 MIR1302-4 CREB1 ENSG00000240440 ENSG00000234902 METTL21A MIR7845 NONHSAG030356.2
GH02J206462 Enhancer 0.7 Ensembl ENCODE 5 -703.5 -703519 2.4 HDAC2 YY1 NANOG MEF2B TCF12 TAF1 SRF CHD7 EP300 SP1 ZDBF2 ADAM23 MYOSLID piR-31311-017
GH02J207140 Promoter/Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -23.1 -23144 4.7 ZIC2 TRIM28 CTCF RAD21 OSR2 NR2F2 ZNF384 ZKSCAN1 POLR2A REST KLF7 MIR2355 MIR1302-4 CREB1 METTL21A KLF7-IT1 MYOSLID lnc-MDH1B-8
GH02J207151 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.4 -12.1 -12131 5.9 EP300 JUND RELA ZBTB17 ZNF384 GATA3 TFDP1 POLR2A ZBTB33 SPI1 MIR2355 MIR1302-4 KLF7 CREB1 MYOSLID lnc-MDH1B-8 KLF7-IT1
GH02J207131 Promoter/Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 -31.8 -31794 6.5 EP300 JUND TRIM28 ATF2 OSR2 KDM1A BCL11A KLF9 WT1 NFIC MIR2355 KLF7 KLF7-IT1 MYOSLID lnc-MDH1B-8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MYOSLID on UCSC Golden Path with GeneCards custom track

Genomic Locations for MYOSLID Gene

Genomic Locations for MYOSLID Gene
chr2:207,166,120-207,253,443
(GRCh38/hg38)
Size:
87,324 bases
Orientation:
Plus strand
chr2:208,104,374-208,110,611
(GRCh37/hg19)
Size:
6,238 bases
Orientation:
Plus strand

Genomic View for MYOSLID Gene

Genes around MYOSLID on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MYOSLID Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MYOSLID Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MYOSLID Gene

Proteins for MYOSLID Gene

Post-translational modifications for MYOSLID Gene

No Post-translational modifications

No data available for DME Specific Peptides for MYOSLID Gene

Domains & Families for MYOSLID Gene

Gene Families for MYOSLID Gene

genes like me logo Genes that share domains with MYOSLID: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MYOSLID Gene

Function for MYOSLID Gene

Phenotypes From GWAS Catalog for MYOSLID Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MYOSLID Gene

Localization for MYOSLID Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MYOSLID Gene

Pathways & Interactions for MYOSLID Gene

PathCards logo

SuperPathways for MYOSLID Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for MYOSLID Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MYOSLID Gene

Drugs & Compounds for MYOSLID Gene

No Compound Related Data Available

Transcripts for MYOSLID Gene

mRNA/cDNA for MYOSLID Gene

14 RNACentral transcripts :
1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :
5 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 NONCODE transcripts :
7 LncBook transcripts :
8 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for MYOSLID Gene

No ASD Table

Relevant External Links for MYOSLID Gene

GeneLoc Exon Structure for
MYOSLID

Expression for MYOSLID Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MYOSLID Gene

Orthologs for MYOSLID Gene

Evolution for MYOSLID Gene

ENSEMBL:
Gene Tree for MYOSLID (if available)
TreeFam:
Gene Tree for MYOSLID (if available)

No data available for Orthologs for MYOSLID Gene

Paralogs for MYOSLID Gene

No data available for Paralogs for MYOSLID Gene

Variants for MYOSLID Gene

Additional dbSNP identifiers (rs#s) for MYOSLID Gene

Additional Variant Information for MYOSLID Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MYOSLID

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MYOSLID Gene

Disorders for MYOSLID Gene

Additional Disease Information for MYOSLID

No disorders were found for MYOSLID Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MYOSLID Gene

Publications for MYOSLID Gene

  1. MYOSLID Is a Novel Serum Response Factor-Dependent Long Noncoding RNA That Amplifies the Vascular Smooth Muscle Differentiation Program. (PMID: 27444199) Zhao J … Long X (Arteriosclerosis, thrombosis, and vascular biology 2016) 2 3 54
  2. Long noncoding RNA MYOSLID promotes invasion and metastasis by modulating the partial epithelial-mesenchymal transition program in head and neck squamous cell carcinoma. (PMID: 31238980) Xiong HG … Sun ZJ (Journal of experimental & clinical cancer research : CR 2019) 3 54
  3. Long non-coding RNA MYOSLID functions as a competing endogenous RNA to regulate MCL-1 expression by sponging miR-29c-3p in gastric cancer. (PMID: 31497917) Han Y … Xie X (Cell proliferation 2019) 3

Products for MYOSLID Gene

Sources for MYOSLID Gene