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Aliases for MYCBP2-AS1 Gene

Subcategory (RNA class) for MYCBP2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for MYCBP2-AS1 Gene

  • MYCBP2 Antisense RNA 1 2 3 5
  • MYCBP2 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for MYCBP2-AS1 Gene

Previous GeneCards Identifiers for MYCBP2-AS1 Gene

  • GC00U933125
  • GC13P077650

Summaries for MYCBP2-AS1 Gene

GeneCards Summary for MYCBP2-AS1 Gene

MYCBP2-AS1 (MYCBP2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for MYCBP2-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MYCBP2-AS1 Gene

Genomics for MYCBP2-AS1 Gene

GeneHancer (GH) Regulatory Elements for MYCBP2-AS1 Gene

Promoters and enhancers for MYCBP2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13I077025 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 555.9 +0.1 74 3.5 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A FEZF1 YY1 POLR2B ZNF766 FBXL3 MYCBP2-AS1 ENSG00000274898 MYCBP2-AS2 CLN5 ENSG00000283208
GH13I077047 Enhancer 0.6 Ensembl ENCODE 11.6 +21.7 21661 1.8 ZNF680 ATF2 EZH2 MYCBP2-AS1 CLN5 ENSG00000274898 MYCBP2-AS2 ENSG00000283208 MYCBP2
GH13I077328 Enhancer 1.4 Ensembl ENCODE dbSUPER 4.9 +302.9 302946 2.9 HDGF PKNOX1 FOXA2 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 IRF4 MYCBP2-AS1 CLN5 MYCBP2 LOC105370271
GH13I077297 Enhancer 0.8 Ensembl ENCODE dbSUPER 4.9 +271.6 271575 1.6 IKZF2 SPI1 MYCBP2 CLN5 MYCBP2-AS1 GC13P077273
GH13I077049 Enhancer 0.2 Ensembl 11.6 +22.9 22934 0.2 MYCBP2-AS1 ENSG00000274898 MYCBP2-AS2 ENSG00000283208 MYCBP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MYCBP2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MYCBP2-AS1 Gene

Genomic Locations for MYCBP2-AS1 Gene
102,951 bases
Plus strand

Genomic View for MYCBP2-AS1 Gene

Genes around MYCBP2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MYCBP2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MYCBP2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MYCBP2-AS1 Gene

Proteins for MYCBP2-AS1 Gene

Post-translational modifications for MYCBP2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MYCBP2-AS1 Gene

Domains & Families for MYCBP2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MYCBP2-AS1 Gene

Function for MYCBP2-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MYCBP2-AS1 Gene

Localization for MYCBP2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MYCBP2-AS1 Gene

Pathways & Interactions for MYCBP2-AS1 Gene

SuperPathways for MYCBP2-AS1 Gene

No Data Available

Interacting Proteins for MYCBP2-AS1 Gene

Gene Ontology (GO) - Biological Process for MYCBP2-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for MYCBP2-AS1 Gene

Drugs & Compounds for MYCBP2-AS1 Gene

No Compound Related Data Available

Transcripts for MYCBP2-AS1 Gene

mRNA/cDNA for MYCBP2-AS1 Gene

(1) Additional mRNA sequences :
(10) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MYCBP2-AS1 Gene

MYCBP2 antisense RNA 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MYCBP2-AS1 Gene

No ASD Table

Relevant External Links for MYCBP2-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MYCBP2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MYCBP2-AS1 Gene

SOURCE GeneReport for Unigene cluster for MYCBP2-AS1 Gene:

genes like me logo Genes that share expression patterns with MYCBP2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MYCBP2-AS1 Gene

Orthologs for MYCBP2-AS1 Gene

Evolution for MYCBP2-AS1 Gene

Gene Tree for MYCBP2-AS1 (if available)
Gene Tree for MYCBP2-AS1 (if available)

No data available for Orthologs for MYCBP2-AS1 Gene

Paralogs for MYCBP2-AS1 Gene

No data available for Paralogs for MYCBP2-AS1 Gene

Variants for MYCBP2-AS1 Gene

Sequence variations from dbSNP and Humsavar for MYCBP2-AS1 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1000179072 -- 77,074,360(+) T/C upstream_transcript_variant
rs1000443632 -- 77,079,001(+) T/A intron_variant
rs1000456937 -- 77,081,397(+) A/G intron_variant
rs1000622555 -- 77,077,783(+) T/G intron_variant
rs1000916342 -- 77,085,209(+) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for MYCBP2-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv832653 CNV loss 17160897
esv2759951 CNV loss 17122850

Additional Variant Information for MYCBP2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MYCBP2-AS1 Gene

Disorders for MYCBP2-AS1 Gene

Additional Disease Information for MYCBP2-AS1

No disorders were found for MYCBP2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MYCBP2-AS1 Gene

Publications for MYCBP2-AS1 Gene

  1. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington JJ … Ducar M (Nature biotechnology 2001) 3 58

Products for MYCBP2-AS1 Gene

Sources for MYCBP2-AS1 Gene

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