Aliases for MYB-AS1 Gene

Subcategory (RNA class) for MYB-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for MYB-AS1 Gene

  • MYB Antisense RNA 1 2 3 5
  • MYB Antisense RNA 1 (Non-Protein Coding) 2 3
  • MYB-AS1 2 168
  • MYB Antisense RNA (Non-Protein Coding) 2
  • Non-Protein Coding RNA 209 2
  • NONHSAG044909 92
  • HSALNG0053662 167
  • NCRNA00209 3
  • MYB-AS 3
  • MYBAS 3

External Ids for MYB-AS1 Gene

Previous HGNC Symbols for MYB-AS1 Gene

  • MYBAS
  • MYB-AS

Previous GeneCards Identifiers for MYB-AS1 Gene

  • GC00U931543
  • GC06M135517

Summaries for MYB-AS1 Gene

GeneCards Summary for MYB-AS1 Gene

MYB-AS1 (MYB Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for MYB-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MYB-AS1 Gene

Genomics for MYB-AS1 Gene

GeneHancer (GH) Regulatory Elements for MYB-AS1 Gene

Promoters and enhancers for MYB-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J135235 Enhancer 0.8 Ensembl dbSUPER 500.7 -0.2 -183 1.6 PBX2 SPI1 EHMT2 ZC3H8 HDAC2 ZBTB7A HLTF NCOA4 MEIS2 KDM1A LOC105378011 MYB-AS1 lnc-AHI1-4 piR-48820-085
GH06J135236 Enhancer 0.4 Ensembl dbSUPER 500.7 +1.1 1117 0.2 PKNOX1 LOC105378011 MYB-AS1 ENSG00000232876 NONHSAG044910.2
GH06J135052 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 10.6 +182.0 182046 3.7 EP300 ZNF217 ZSCAN5C SIN3A NRF1 POLR2G NCOR1 GTF2E2 PHF8 ZFX HBS1L ENSG00000232876 piR-35431 ALDH8A1 MYB MYB-AS1 AHI1 lnc-ALDH8A1-2
GH06J135423 Enhancer 1.1 Ensembl ENCODE dbSUPER 12 -188.6 -188583 2.8 ZBTB40 CTCF REST TOE1 RAD21 TRIM22 ZNF830 SMC3 HDAC3 ZNF316 AHI1 MYB MYB-AS1 ENSG00000224374 RF00994-956 ENSG00000201012
GH06J135092 Enhancer 1.2 Ensembl ENCODE dbSUPER 10.4 +142.2 142217 3.2 GTF2E2 JUND HES1 RUNX1 TRIM22 NCOR1 MBD2 NEUROD1 ZNF384 GABPA ALDH8A1 MYB MYB-AS1 ENSG00000232876 lnc-MYB-8 HBS1L
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MYB-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MYB-AS1 Gene

Genomic Locations for MYB-AS1 Gene
chr6:135,193,611-135,236,218
(GRCh38/hg38)
Size:
42,608 bases
Orientation:
Minus strand
chr6:135,516,221-135,517,133
(GRCh37/hg19)
Size:
913 bases
Orientation:
Minus strand

Genomic View for MYB-AS1 Gene

Genes around MYB-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MYB-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MYB-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for MYB-AS1 Gene

Proteins for MYB-AS1 Gene

Post-translational modifications for MYB-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MYB-AS1 Gene

Domains & Families for MYB-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MYB-AS1 Gene

Function for MYB-AS1 Gene

Phenotypes From GWAS Catalog for MYB-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MYB-AS1 Gene

Localization for MYB-AS1 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for MYB-AS1 gene
Compartment Confidence
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MYB-AS1 Gene

Pathways & Interactions for MYB-AS1 Gene

PathCards logo

SuperPathways for MYB-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for MYB-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MYB-AS1 Gene

Drugs & Compounds for MYB-AS1 Gene

No Compound Related Data Available

Transcripts for MYB-AS1 Gene

mRNA/cDNA for MYB-AS1 Gene

4 RNACentral transcripts :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
4 NONCODE transcripts :
3 LncBook transcripts :
3 LNCipedia transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for MYB-AS1 Gene

No ASD Table

Relevant External Links for MYB-AS1 Gene

GeneLoc Exon Structure for
MYB-AS1

Expression for MYB-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MYB-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for MYB-AS1 Gene

This gene is overexpressed in Colon - Transverse (x9.9), Breast - Mammary Tissue (x6.6), and Testis (x4.7).
genes like me logo Genes that share expression patterns with MYB-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MYB-AS1 Gene

Orthologs for MYB-AS1 Gene

Evolution for MYB-AS1 Gene

ENSEMBL:
Gene Tree for MYB-AS1 (if available)
TreeFam:
Gene Tree for MYB-AS1 (if available)

No data available for Orthologs for MYB-AS1 Gene

Paralogs for MYB-AS1 Gene

No data available for Paralogs for MYB-AS1 Gene

Variants for MYB-AS1 Gene

Additional Variant Information for MYB-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MYB-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MYB-AS1 Gene

Disorders for MYB-AS1 Gene

No disorders were found for MYB-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MYB-AS1 Gene

Publications for MYB-AS1 Gene

No publications were found for MYB-AS1 Gene.

Products for MYB-AS1 Gene

Sources for MYB-AS1 Gene