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Aliases for MTRF1LP1 Gene
Aliases for MTRF1LP1 Gene
External Ids for MTRF1LP1 Gene
- HGNC: 50611
- NCBI Entrez Gene: 100132520
- Ensembl: ENSG00000256091
Summaries for MTRF1LP1 Gene
GeneCards Summary for MTRF1LP1 Gene
MTRF1LP1 (Mitochondrial Translational Release Factor 1 Like Pseudogene 1) is a Pseudogene.
Additional gene information for MTRF1LP1 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MTRF1LP1 Gene
Genomics for MTRF1LP1 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for MTRF1LP1 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH11J113725 | Enhancer | 0.9 | Ensembl ENCODE | 0.4 | +17.1 | 17081 | 6.8 | IKZF1 CTCF REST SMC3 RAD21 SKIL FOSL1 PRDM6 SPI1 SMARCA4 | ENSG00000255129 TTC12 LRRC37A13P RNU6-1107P TMPRSS5 ATF4P4 USP28 DRD2 MTRF1LP1 RPS29P19 | |
| GH11J113721 | Enhancer | 0.3 | Ensembl | 0.4 | +10.4 | 10419 | 0.9 | BCL6 ZBTB40 | TMPRSS5 MTRF1LP1 RPS29P19 ZW10 lnc-ZW10-1 | |
| GH11J113723 | Enhancer | 0.2 | Ensembl | 0.4 | +11.8 | 11781 | 0.2 | RNU6-1107P MTRF1LP1 TMPRSS5 RPS29P19 ZW10 lnc-ZW10-1 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around MTRF1LP1 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for MTRF1LP1 Gene
Latest Assembly
- chr11:113,711,720-113,712,399
- (GRCh38/hg38)
- Size:
- 680 bases
- Orientation:
- Plus strand
Previous Assembly
- chr11:113,582,452-113,583,121
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 670 bases
- Orientation:
- Plus strand
- chr11:113,582,442-113,583,120
- (GRCh37/hg19 by Ensembl)
- Size:
- 679 bases
- Orientation:
- Plus strand
Genomic View for MTRF1LP1 Gene
Genes around MTRF1LP1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 11q23.2 by HGNC
- 11q23.2 by Entrez Gene
- 11q23.2 by Ensembl
MTRF1LP1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for MTRF1LP1 Gene
Proteins for MTRF1LP1 Gene
Post-translational modifications for MTRF1LP1 Gene
No Post-translational modifications
Antibodies for research
Protein products for research
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for MTRF1LP1
- Origene Custom Protein Services for MTRF1LP1
Assay products for research
No data available for DME Specific Peptides for MTRF1LP1 Gene
Domains & Families for MTRF1LP1 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MTRF1LP1 Gene
Function for MTRF1LP1 Gene
Animal Models for research
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR products for research
- Browse CRISPR knockouts for MTRF1LP1
miRNA products for research
Inhibitory RNAs for research
Clone products for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MTRF1LP1 Gene
Localization for MTRF1LP1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MTRF1LP1 Gene
Transcripts for MTRF1LP1 Gene
mRNA/cDNA for MTRF1LP1 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000321235 679 nts (view in UCSC)
CRISPR products for research
- Browse CRISPR knockouts for MTRF1LP1
miRNA products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for MTRF1LP1 Gene
- GeneLoc Exon Structure for
- MTRF1LP1
Expression for MTRF1LP1 Gene
Primer products for research
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MTRF1LP1 Gene
Orthologs for MTRF1LP1 Gene
No data available for Orthologs for MTRF1LP1 Gene
Paralogs for MTRF1LP1 Gene
No data available for Paralogs for MTRF1LP1 Gene
Variants for MTRF1LP1 Gene
Additional Variant Information for MTRF1LP1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- MTRF1LP1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MTRF1LP1 Gene
Disorders for MTRF1LP1 Gene
No disorders were found for MTRF1LP1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MTRF1LP1 Gene
Publications for MTRF1LP1 Gene
No publications were found for MTRF1LP1 Gene.
No data available for Mastermind for MTRF1LP1 Gene
Products for MTRF1LP1 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for MTRF1LP1
- Origene Custom Protein Services for MTRF1LP1
- Browse OriGene Inhibitory RNA Products For MTRF1LP1
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for MTRF1LP1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For MTRF1LP1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for MTRF1LP1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for MTRF1LP1
- Search GeneCopoeia for miRNA 3'UTR Target clone products for MTRF1LP1
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for MTRF1LP1
Sources for MTRF1LP1 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB