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Aliases for MTOR-AS1 Gene

Subcategory (RNA class) for MTOR-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MTOR-AS1 Gene

  • MTOR Antisense RNA 1 2 3 5
  • MTOR Antisense RNA 1 (Non-Protein Coding) 2

External Ids for MTOR-AS1 Gene

Previous GeneCards Identifiers for MTOR-AS1 Gene

  • GC00U933341
  • GC01P011204

Summaries for MTOR-AS1 Gene

GeneCards Summary for MTOR-AS1 Gene

MTOR-AS1 (MTOR Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for MTOR-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MTOR-AS1 Gene

Genomics for MTOR-AS1 Gene

GeneHancer (GH) Regulatory Elements for MTOR-AS1 Gene

Promoters and enhancers for MTOR-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I011144 Enhancer 0.2 ENCODE 550.8 +0.2 201 0.2 MTOR-AS1 RNU6-537P MTOR
GH01I011280 Enhancer 1 Ensembl ENCODE 9.7 +137.8 137806 3.2 HDGF FEZF1 FOSL1 POLR2B ZNF316 POLR2A VEZF1 PRDM10 ETV6 MAFK MTOR-AS1 EXOSC10 MASP2 UBE2V2P3 PIR33705 UBIAD1 GC01M011183
GH01I010758 Enhancer 1 Ensembl ENCODE dbSUPER 8.8 -383.0 -383044 4.5 SCRT1 ZNF687 RFX1 SP5 ZNF384 PPARG RAD21 SCRT2 HNF4G FOS MTOR-AS1 MTOR CASZ1 GC01P010673
GH01I011062 Enhancer 0.8 ENCODE 10.7 -80.8 -80759 1.2 PKNOX1 SMAD1 BMI1 BATF IRF4 ZNF121 ATF7 BCLAF1 IKZF2 RUNX3 TARDBP MTOR-AS1 MTOR GC01P011060 ENSG00000226849
GH01I010765 Enhancer 0.8 ENCODE dbSUPER 8.8 -378.1 -378050 1.7 BCOR ZNF189 BHLHE40 ZSCAN4 ZMYM3 KLF9 HNF4A ZBTB33 MTOR-AS1 MTOR CASZ1 GC01P010673
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MTOR-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MTOR-AS1 Gene

Genomic Locations for MTOR-AS1 Gene
chr1:11,143,898-11,149,538
(GRCh38/hg38)
Size:
5,641 bases
Orientation:
Plus strand
chr1:11,203,955-11,209,594
(GRCh37/hg19)

Genomic View for MTOR-AS1 Gene

Genes around MTOR-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MTOR-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MTOR-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MTOR-AS1 Gene

Proteins for MTOR-AS1 Gene

Post-translational modifications for MTOR-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MTOR-AS1 Gene

Domains & Families for MTOR-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MTOR-AS1 Gene

Function for MTOR-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MTOR-AS1 Gene

Localization for MTOR-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MTOR-AS1 Gene

Pathways & Interactions for MTOR-AS1 Gene

SuperPathways for MTOR-AS1 Gene

No Data Available

Interacting Proteins for MTOR-AS1 Gene

Gene Ontology (GO) - Biological Process for MTOR-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MTOR-AS1 Gene

Drugs & Compounds for MTOR-AS1 Gene

No Compound Related Data Available

Transcripts for MTOR-AS1 Gene

mRNA/cDNA for MTOR-AS1 Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MTOR-AS1 Gene

MTOR antisense RNA 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MTOR-AS1 Gene

No ASD Table

Relevant External Links for MTOR-AS1 Gene

GeneLoc Exon Structure for
MTOR-AS1
ECgene alternative splicing isoforms for
MTOR-AS1

Expression for MTOR-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MTOR-AS1 Gene

SOURCE GeneReport for Unigene cluster for MTOR-AS1 Gene:

Hs.679133
genes like me logo Genes that share expression patterns with MTOR-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MTOR-AS1 Gene

Orthologs for MTOR-AS1 Gene

Evolution for MTOR-AS1 Gene

ENSEMBL:
Gene Tree for MTOR-AS1 (if available)
TreeFam:
Gene Tree for MTOR-AS1 (if available)

No data available for Orthologs for MTOR-AS1 Gene

Paralogs for MTOR-AS1 Gene

No data available for Paralogs for MTOR-AS1 Gene

Variants for MTOR-AS1 Gene

Sequence variations from dbSNP and Humsavar for MTOR-AS1 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs869312671 pathogenic, Smith-Kingsmore syndrome 11,144,735(+) C/T non_coding_transcript_variant
rs886041096 uncertain-significance, Smith-Kingsmore syndrome 11,146,756(+) T/C intron_variant
rs1000991364 -- 11,144,866(+) C/T non_coding_transcript_variant
rs1001062962 -- 11,142,665(+) G/A upstream_transcript_variant
rs1001361977 -- 11,147,060(+) G/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for MTOR-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1122297 CNV deletion 24896259
nsv545407 CNV gain 21841781

Additional Variant Information for MTOR-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MTOR-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MTOR-AS1 Gene

Disorders for MTOR-AS1 Gene

Additional Disease Information for MTOR-AS1

No disorders were found for MTOR-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MTOR-AS1 Gene

Publications for MTOR-AS1 Gene

  1. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington JJ … Ducar M (Nature biotechnology 2001) 3 58

Products for MTOR-AS1 Gene

Sources for MTOR-AS1 Gene

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