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This gene encodes a mitochondrial protein thought to be involved in mitochondrial tRNA modification. The encoded protein may also play a role in the expression of the non-syndromic and aminoglycoside-induced deafness phenotypes associated with a specific mutation in the mitochondrial 12S rRNA gene. Multiple transcript variants encoding different isoforms have been found for thi... See more...
Aliases for MTO1 Gene
Aliases for MTO1 Gene
External Ids for MTO1 Gene
- HGNC: 19261
- Entrez Gene: 25821
- Ensembl: ENSG00000135297
- OMIM: 614667
- UniProtKB: Q9Y2Z2
Previous GeneCards Identifiers for MTO1 Gene
- GC06P074129
- GC06P074167
- GC06P074228
- GC06P074171
- GC06P071369
Summaries for MTO1 Gene
-
This gene encodes a mitochondrial protein thought to be involved in mitochondrial tRNA modification. The encoded protein may also play a role in the expression of the non-syndromic and aminoglycoside-induced deafness phenotypes associated with a specific mutation in the mitochondrial 12S rRNA gene. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
GeneCards Summary for MTO1 Gene
MTO1 (Mitochondrial TRNA Translation Optimization 1) is a Protein Coding gene. Diseases associated with MTO1 include Combined Oxidative Phosphorylation Deficiency 10 and Mitochondrial Oxidative Phosphorylation Disorder. Among its related pathways are Gene Expression and tRNA processing. Gene Ontology (GO) annotations related to this gene include flavin adenine dinucleotide binding.
UniProtKB/Swiss-Prot Summary for MTO1 Gene
-
Involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U34) of the wobble uridine base in mitochondrial tRNAs.
Additional gene information for MTO1 Gene
- Monarch Initiative
- Search for MTO1 at DataMed
- Search for MTO1 at HumanCyc
No data available for CIViC Summary , Tocris Summary , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MTO1 Gene
Genomics for MTO1 Gene
GeneHancer (GH) Regulatory Elements for MTO1 Gene
Promoters and enhancers for MTO1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around MTO1 on UCSC Golden Path with GeneCards custom track
Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for MTO1
Genomic Locations for MTO1 Gene
Genomic Locations for MTO1 Gene
- chr6:73,461,578-73,509,236
- (GRCh38/hg38)
- Size:
- 47,659 bases
- Orientation:
- Plus strand
- chr6:74,171,301-74,218,959
- (GRCh37/hg19)
- Size:
- 47,659 bases
- Orientation:
- Plus strand
Genomic View for MTO1 Gene
Genes around MTO1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 6q13 by HGNC
- 6q13 by Entrez Gene
- 6q13 by Ensembl
MTO1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for MTO1 Gene
Proteins for MTO1 Gene
-
Protein details for MTO1 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q9Y2Z2-MTO1_HUMAN
- Recommended name:
- Protein MTO1 homolog, mitochondrial
- Protein Accession:
- Q9Y2Z2
- B3KQB5
- Q5SWL2
- Q5SWL3
- Q5SWL4
- Q8NDN7
- Q8WZ57
- Q96FE6
- Q9BS06
Protein attributes for MTO1 Gene
- Size:
- 717 amino acids
- Molecular mass:
- 79964 Da
- Cofactor:
- Name=FAD; Xref=ChEBI:CHEBI:57692;
- Quaternary structure:
- No Data Available
- SequenceCaution:
-
- Sequence=AAD27712.1; Type=Frameshift; Evidence={ECO:0000305}; Sequence=AAH05808.2; Type=Erroneous initiation; Note=Extended N-terminus.; Evidence={ECO:0000305};
Protein Expression for MTO1 Gene
Selected DME Specific Peptides for MTO1 Gene
- Q9Y2Z2:
-
- TIRDVSL
- VIGLETH
Post-translational modifications for MTO1 Gene
Other Protein References for MTO1 Gene
Antibody Products
- G Biosciences Immunotag™ MTO1 Antibody
- Creative Diagnostics Anti-MTO1 polyclonal antibody
- Creative Biolabs Mouse Anti-MTO1 Recombinant Antibody (CBFYM-2760)
-
Custom Antibody ServicesOriGene Antibodies for MTO1
- Novus Biologicals Antibodies for MTO1
- Invitrogen Antibodies for MTO1 (AFLGC-MTO1)
- antibodies-online: Show 7 available MTO1 Antibodies ranked by validation data
-
Biorbyt antibodies for MTO1
-
Santa Cruz Biotechnology (SCBT) Antibodies for MTO1
Protein Products
-
OriGene Purified Proteins for MTO1
- Search Origene for MassSpec and Protein Over-expression Lysates for MTO1
- Origene Custom Protein Services for MTO1
- antibodies-online: Search results for available MTO1 related products ranked by validation data
Assay Products
- antibodies-online: Search results for available MTO1 related products ranked by validation data
Domains & Families for MTO1 Gene
Gene Families for MTO1 Gene
- Human Protein Atlas (HPA):
-
- Disease related genes
- Predicted intracellular proteins
Protein Domains for MTO1 Gene
- Blocks:
-
- Glucose-inhibited division protein, A family
- InterPro:
- ProtoNet:
Suggested Antigen Peptide Sequences for MTO1 Gene
- GenScript: Design optimal peptide antigens:
-
- Mitochondrial translation optimization 1 homolog (S. cerevisiae) (A2A6U7_HUMAN)
- Protein MTO1 homolog, mitochondrial (MTO1_HUMAN)
Graphical View of Domain Structure for InterPro Entry
Q9Y2Z2- Family:
-
- Belongs to the MnmG family.
Function for MTO1 Gene
Molecular function for MTO1 Gene
- UniProtKB/Swiss-Prot Function:
- Involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U34) of the wobble uridine base in mitochondrial tRNAs.
Enzyme Numbers (IUBMB) for MTO1 Gene
Phenotypes From GWAS Catalog for MTO1 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0003723 | RNA binding | HDA | 22681889 |
| GO:0050660 | flavin adenine dinucleotide binding | IEA,IBA | 21873635 |
Phenotypes for MTO1 Gene
- MGI mutant phenotypes for MTO1:
- inferred from 1 alleles
- GenomeRNAi human phenotypes for MTO1:
Animal Model Products
-
Taconic Biosciences Mouse Models for MTO1
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for MTO1 - Select products 50% OFF >
- * MTO1 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
OriGene CRISPR knockouts for MTO1
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for MTO1
- genomics-online: gRNA clones - Search results for available MTO1 gene related products
-
Santa Cruz Biotechnology (SCBT) CRISPR for MTO1
miRNA for MTO1 Gene
- miRTarBase miRNAs that target MTO1
-
- hsa-mir-100-5p (MIRT048594)
- hsa-mir-5698 (MIRT617544)
- hsa-mir-744-3p (MIRT617545)
- hsa-mir-7641 (MIRT617546)
- hsa-mir-4423-5p (MIRT617547)
- hsa-mir-6501-5p (MIRT617548)
- hsa-mir-143-5p (MIRT617549)
- hsa-mir-4430 (MIRT617550)
- hsa-mir-3652 (MIRT617551)
- hsa-mir-122-5p (MIRT617552)
- hsa-mir-504-3p (MIRT617553)
- hsa-mir-3135b (MIRT617554)
- hsa-mir-6499-3p (MIRT617555)
- hsa-mir-4695-3p (MIRT617556)
- hsa-mir-367-5p (MIRT617557)
- hsa-mir-1267 (MIRT617558)
- hsa-mir-5693 (MIRT617559)
- hsa-mir-4742-3p (MIRT625220)
- hsa-mir-205-3p (MIRT625221)
- hsa-mir-603 (MIRT625222)
- hsa-mir-8485 (MIRT625223)
- hsa-mir-8055 (MIRT661695)
- hsa-mir-6864-3p (MIRT661696)
- hsa-mir-3672 (MIRT661697)
- hsa-mir-4790-5p (MIRT661698)
- hsa-mir-4524a-3p (MIRT661699)
- hsa-mir-4315 (MIRT661700)
- hsa-mir-5007-5p (MIRT661701)
- hsa-mir-6787-3p (MIRT661702)
- hsa-mir-6736-3p (MIRT661703)
- hsa-mir-6836-3p (MIRT661704)
- hsa-mir-5001-3p (MIRT661705)
- hsa-mir-891a-3p (MIRT661706)
- hsa-mir-6829-3p (MIRT661707)
- hsa-mir-6791-3p (MIRT661708)
- hsa-mir-6778-3p (MIRT661709)
- hsa-mir-4772-3p (MIRT661710)
- hsa-mir-660-3p (MIRT661711)
- hsa-mir-216a-5p (MIRT661712)
- hsa-mir-7151-3p (MIRT669934)
- hsa-mir-5095 (MIRT669935)
- hsa-mir-365b-5p (MIRT669936)
- hsa-mir-365a-5p (MIRT669937)
- hsa-mir-8052 (MIRT669938)
- hsa-mir-3199 (MIRT669939)
- hsa-mir-4438 (MIRT669940)
- hsa-mir-6805-3p (MIRT671276)
- hsa-mir-5691 (MIRT671277)
- hsa-mir-431-5p (MIRT671278)
- hsa-mir-3194-3p (MIRT671279)
- hsa-mir-129-5p (MIRT674111)
- hsa-mir-498 (MIRT683624)
- hsa-mir-6783-3p (MIRT683625)
- hsa-mir-1343-3p (MIRT683626)
- hsa-mir-23b-5p (MIRT683627)
- hsa-mir-23a-5p (MIRT683628)
- hsa-mir-6742-3p (MIRT683629)
- hsa-mir-6852-5p (MIRT683630)
- hsa-mir-132-3p (MIRT762536)
- hsa-mir-212-3p (MIRT763822)
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for MTO1
- Browse OriGene Inhibitory RNA Products For MTO1
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for MTO1
- genomics-online: shRNA clones - Search results for available MTO1 gene related products
Clone Products
- Applied Biological Materials (abm): Clones for MTO1 - Select products 50% OFF >
- * MTO1 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
- MG206766
- MG216427
- MR206766
- MR206766L3
- MR216427
- MR216427L3
- MR216427L4
- RC203738
- RC203738L1
- RC203738L2
- RC203738L3
- RC203738L4
- RC222884
- RC222884L3
- RC222884L4
- RC226122
- RC226122L3
- RC226122L4
- RG203738
- RG222884
- RG226122
- RR202264
- RR202264L3
- RR202264L4
- MR206766L3V
- MR216427L3V
- MR216427L4V
- RC203738L1V
- RC203738L2V
- RC203738L3V
- RC203738L4V
- RC222884L3V
- RC222884L4V
- RC226122L3V
- RC226122L4V
- RR202264L3V
- RR202264L4V
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Sino Biological Human cDNA Clone for MTO1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for MTO1
- genomics-online: cdna clones - Search results for available MTO1 gene related products
- orf clones - Search results for available MTO1 gene related products
Cell Line Products
-
Horizon Cell Lines for MTO1
No data available for Animal Models , Transcription Factor Targets and HOMER Transcription for MTO1 Gene
Localization for MTO1 Gene
Subcellular locations from UniProtKB/Swiss-Prot for MTO1 Gene
- Mitochondrion.
| Compartment | Confidence |
|---|---|
| mitochondrion | 4 |
| nucleus | 3 |
| cytosol | 3 |
| plasma membrane | 1 |
| extracellular | 1 |
| cytoskeleton | 1 |
| endoplasmic reticulum | 1 |
| endosome | 1 |
| lysosome | 1 |
| golgi apparatus | 1 |
| peroxisome | 0 |
- Cytosol (2)
- Nucleoplasm (2)
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005739 | mitochondrion | IBA | 21873635 |
Pathways & Interactions for MTO1 Gene
| SuperPathway | Contained pathways | ||
|---|---|---|---|
| 1 | tRNA processing |
.55
|
|
| 2 | Gene Expression |
.48
|
|
Pathways by source for MTO1 Gene
3 Reactome pathways for MTO1 Gene
Interacting Proteins for MTO1 Gene
GPS-Prot Interaction Network for MTO1
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0002098 | tRNA wobble uridine modification | IBA | 21873635 |
| GO:0008033 | tRNA processing | IEA | -- |
| GO:0030488 | tRNA methylation | IBA | 21873635 |
| GO:0070899 | mitochondrial tRNA wobble uridine modification | IBA | 21873635 |
No data available for SIGNOR curated interactions for MTO1 Gene
Drugs & Compounds for MTO1 Gene
| Name | Status | Disease Links | Group | Role | Mechanism of Action | Clinical Trials |
|---|---|---|---|---|---|---|
| FAD | Approved | Pharma | 0 |
Transcripts for MTO1 Gene
mRNA/cDNA for MTO1 Gene
- 3 REFSEQ mRNAs :
- 17 NCBI additional mRNA sequence :
- 19 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000370300 2961 bps (ENST00000370300.8)
- ENST00000370305 2174 bps (ENST00000370305.5)
- ENST00000370308 2621 bps (ENST00000370308.8)
- ENST00000415228 2240 bps (ENST00000415228.5)
- ENST00000415954 2837 bps (ENST00000415954.6)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for MTO1 - Select products 50% OFF >
- * MTO1 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
OriGene CRISPR knockouts for MTO1
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for MTO1
- genomics-online: gRNA clones - Search results for available MTO1 gene related products
-
Santa Cruz Biotechnology (SCBT) CRISPR for MTO1
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for MTO1
- Browse OriGene Inhibitory RNA Products For MTO1
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for MTO1
- genomics-online: shRNA clones - Search results for available MTO1 gene related products
Clone Products
- Applied Biological Materials (abm): Clones for MTO1 - Select products 50% OFF >
- * MTO1 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
- MG206766
- MG216427
- MR206766
- MR206766L3
- MR216427
- MR216427L3
- MR216427L4
- RC203738
- RC203738L1
- RC203738L2
- RC203738L3
- RC203738L4
- RC222884
- RC222884L3
- RC222884L4
- RC226122
- RC226122L3
- RC226122L4
- RG203738
- RG222884
- RG226122
- RR202264
- RR202264L3
- RR202264L4
- MR206766L3V
- MR216427L3V
- MR216427L4V
- RC203738L1V
- RC203738L2V
- RC203738L3V
- RC203738L4V
- RC222884L3V
- RC222884L4V
- RC226122L3V
- RC226122L4V
- RR202264L3V
- RR202264L4V
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Sino Biological Human cDNA Clone for MTO1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for MTO1
- genomics-online: cdna clones - Search results for available MTO1 gene related products
- orf clones - Search results for available MTO1 gene related products
| ExUns: | 1a | · | 1b | ^ | 2a | · | 2b | · | 2c | ^ | 3a | · | 3b | · | 3c | ^ | 4 | ^ | 5 | ^ | 6a | · | 6b | ^ | 7a | · | 7b | · | 7c | · | 7d | ^ | 8a | · | 8b | ^ | 9 | ^ | 10a | · | 10b | ^ | 11a | · | 11b | ^ | 12 | ^ | 13 | ^ | 14a | · |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SP1: | - | - | - | - | - | - | - | |||||||||||||||||||||||||||||||||||||||||||||
| SP2: | - | - | - | - | - | - | - | - | - | |||||||||||||||||||||||||||||||||||||||||||
| SP3: | - | - | - | - | - | - | - | - | - | |||||||||||||||||||||||||||||||||||||||||||
| SP4: | - | - | - | - | - | - | - | - | - | - | - | - | - | |||||||||||||||||||||||||||||||||||||||
| SP5: | - | - | - | - | - | - | - | - | ||||||||||||||||||||||||||||||||||||||||||||
| SP6: | - | - | - | - | - | - | - | - | - | - | - | - | ||||||||||||||||||||||||||||||||||||||||
| SP7: | - | - | - | - | - | - | ||||||||||||||||||||||||||||||||||||||||||||||
| SP8: | - | - | - | - | - | |||||||||||||||||||||||||||||||||||||||||||||||
| SP9: | - | - | ||||||||||||||||||||||||||||||||||||||||||||||||||
| SP10: | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| SP11: | - | |||||||||||||||||||||||||||||||||||||||||||||||||||
| SP12: | - | - | - | |||||||||||||||||||||||||||||||||||||||||||||||||
| SP13: | - | - | - | |||||||||||||||||||||||||||||||||||||||||||||||||
| SP14: | - | - | ||||||||||||||||||||||||||||||||||||||||||||||||||
| SP15: | - | - | ||||||||||||||||||||||||||||||||||||||||||||||||||
| SP16: | - | |||||||||||||||||||||||||||||||||||||||||||||||||||
| SP17: |
| ExUns: | 14b | · | 14c | · | 14d | · | 14e | ^ | 15 | ^ | 16 | ^ | 17a | · | 17b | ^ | 18 | ^ | 19a | · | 19b | · | 19c |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SP1: | - | ||||||||||||||||||||||
| SP2: | - | ||||||||||||||||||||||
| SP3: | - | ||||||||||||||||||||||
| SP4: | - | ||||||||||||||||||||||
| SP5: | |||||||||||||||||||||||
| SP6: | |||||||||||||||||||||||
| SP7: | |||||||||||||||||||||||
| SP8: | |||||||||||||||||||||||
| SP9: | - | - | - | - | - | ||||||||||||||||||
| SP10: | - | - | |||||||||||||||||||||
| SP11: | |||||||||||||||||||||||
| SP12: | |||||||||||||||||||||||
| SP13: | |||||||||||||||||||||||
| SP14: | |||||||||||||||||||||||
| SP15: | |||||||||||||||||||||||
| SP16: | |||||||||||||||||||||||
| SP17: |
Relevant External Links for MTO1 Gene
- GeneLoc Exon Structure for
- MTO1
Expression for MTO1 Gene
This gene is overexpressed in Liver, secretome (58.4).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for MTO1 Gene
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for MTO1
SOURCE GeneReport for Unigene cluster for MTO1 Gene:
Hs.347614mRNA Expression by UniProt/SwissProt for MTO1 Gene:
Q9Y2Z2-MTO1_HUMAN
Tissue specificity:
Ubiquitously expressed in various tissues, but with a markedly elevated expression in tissues of high metabolic rates including cochlea.
Evidence on tissue expression from TISSUES for MTO1 Gene
- Spleen(4.3)
- Nervous system(3.6)
- Intestine(2.3)
- Muscle(2.1)
- Liver(2)
Phenotype-based relationships between genes and organs from Gene ORGANizer for MTO1 Gene
Germ Layers:
- ectoderm
- mesoderm
Systems:
- cardiovascular
- endocrine
- integumentary
- nervous
- skeletal muscle
Regions:
Head and neck:
- brain
- ear
- head
Thorax:
- heart
- heart valve
Abdomen:
- adrenal gland
General:
- peripheral nerve
- peripheral nervous system
- skin
- sweat gland
Primer Products
-
OriGene qPCR primer pairs for MTO1
-
OriGene qPCR primer pairs and template standards for MTO1
- genomics-online: primer clones - Search results for available MTO1 gene related products
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and Protein tissue co-expression partners for MTO1 Gene
Orthologs for MTO1 Gene
This gene was present in the common ancestor of eukaryotes.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | MTO1 30 |
|
||
| dog (Canis familiaris) |
Mammalia | MTO1 31 30 |
|
OneToOne | |
| cow (Bos Taurus) |
Mammalia | MTO1 31 30 |
|
OneToOne | |
| mouse (Mus musculus) |
Mammalia | Mto1 17 31 30 |
|
||
| rat (Rattus norvegicus) |
Mammalia | Mto1 30 |
|
||
| platypus (Ornithorhynchus anatinus) |
Mammalia | -- 31 |
|
OneToMany | |
| -- 31 |
|
OneToMany | |||
| oppossum (Monodelphis domestica) |
Mammalia | MTO1 31 |
|
OneToOne | |
| chicken (Gallus gallus) |
Aves | MTO1 31 30 |
|
OneToOne | |
| lizard (Anolis carolinensis) |
Reptilia | MTO1 31 |
|
OneToOne | |
| zebrafish (Danio rerio) |
Actinopterygii | mto1 31 30 |
|
OneToOne | |
| fruit fly (Drosophila melanogaster) |
Insecta | CG4610 31 32 30 |
|
OneToOne | |
| African malaria mosquito (Anopheles gambiae) |
Insecta | AgaP_AGAP007661 30 |
|
||
| worm (Caenorhabditis elegans) |
Secernentea | F52H3.2 31 32 30 |
|
OneToOne | |
| K. lactis yeast (Kluyveromyces lactis) |
Saccharomycetes | KLLA0A00935g 30 |
|
||
| baker's yeast (Saccharomyces cerevisiae) |
Saccharomycetes | MTO1 31 30 |
|
OneToOne | |
| A. gosspyii yeast (Ashbya gossypii) |
Saccharomycetes | AGOS_AFR255W 30 |
|
||
| thale cress (Arabidopsis thaliana) |
eudicotyledons | AT2G13440 30 |
|
||
| soybean (Glycine max) |
eudicotyledons | Gma.7119 30 |
|
||
| rice (Oryza sativa) |
Liliopsida | Os01g0960300 30 |
|
||
| Os.37762 30 |
|
||||
| bread mold (Neurospora crassa) |
Ascomycetes | NCU11170 30 |
|
||
| fission yeast (Schizosaccharomyces pombe) |
Schizosaccharomycetes | SPBC30B4.06c 30 |
|
||
| sea squirt (Ciona savignyi) |
Ascidiacea | -- 31 |
|
OneToOne |
- Species where no ortholog for MTO1 was found in the sources mined by GeneCards:
-
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- rainbow trout (Oncorhynchus mykiss)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- tropical clawed frog (Silurana tropicalis)
- wheat (Triticum aestivum)
Evolution for MTO1 Gene
- ENSEMBL:
- Gene Tree for MTO1 (if available)
- TreeFam:
- Gene Tree for MTO1 (if available)
- Aminode:
- Evolutionary constrained regions (ECRs) for MTO1: view image
Paralogs for MTO1 Gene
(5) SIMAP similar genes for MTO1 Gene using alignment to 9 proteins:
- MTO1_HUMAN
- E5RFF7_HUMAN
- E7EWI1_HUMAN
- E7EWX0_HUMAN
- E9PHR8_HUMAN
- H0YB81_HUMAN
- H0YBI9_HUMAN
- H0YC00_HUMAN
- H7C2S9_HUMAN
No data available for Paralogs for MTO1 Gene
Variants for MTO1 Gene
Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for MTO1 Gene
| SNP ID | Clinical significance and condition | Chr 06 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| 638475 | Pathogenic: Combined oxidative phosphorylation deficiency 10 | 73,461,947(+) | GC/G | FRAMESHIFT_VARIANT | |
| 638476 | Uncertain Significance: Combined oxidative phosphorylation deficiency 10 | 73,480,372(+) | G/A | INTRON_VARIANT | |
| 641163 | Uncertain Significance: Combined oxidative phosphorylation deficiency 10 | 73,482,493(+) | G/A | MISSENSE_VARIANT | |
| 648030 | Uncertain Significance: Combined oxidative phosphorylation deficiency 10 | 73,497,885(+) | C/T | MISSENSE_VARIANT | |
| 648658 | Uncertain Significance: Combined oxidative phosphorylation deficiency 10 | 73,461,951(+) | C/T | MISSENSE_VARIANT |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| esv2676283 | CNV | deletion | 23128226 |
| esv2763576 | CNV | gain | 21179565 |
| esv3576177 | CNV | gain | 25503493 |
| esv3609511 | CNV | loss | 21293372 |
| nsv1120157 | OTHER | inversion | 24896259 |
| nsv473211 | CNV | novel sequence insertion | 20440878 |
| nsv823733 | CNV | loss | 20364138 |
| nsv830693 | CNV | loss | 17160897 |
Residual Variation Intolerance Score:
9.98% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score:
2.04;
37.45% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for MTO1 Gene
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MTO1 Gene
Disorders for MTO1 Gene
(16) MalaCards diseases for MTO1 Gene - From: UniProtKB/Swiss-Prot, OMIM, ClinVar, GTR, Orphanet, DISEASES, and GeneCards
| Disorder | Aliases | PubMed IDs |
|---|---|---|
| combined oxidative phosphorylation deficiency 10 |
|
|
| mitochondrial oxidative phosphorylation disorder |
|
|
| combined oxidative phosphorylation deficiency |
|
|
| lactic acidosis |
|
|
| tuberculum sellae meningioma |
|
|
Search MTO1 in MalaCards
View complete list of genes associated with diseases
UniProtKB/Swiss-Prot
MTO1_HUMAN- Combined oxidative phosphorylation deficiency 10 (COXPD10) [MIM:614702]: An autosomal recessive disorder resulting in variable defects of mitochondrial oxidative respiration. Affected individuals present in infancy with hypertrophic cardiomyopathy and lactic acidosis. The severity is variable, but can be fatal in the most severe cases. {ECO:0000269 PubMed:22608499}. Note=The disease is caused by mutations affecting the gene represented in this entry.
Additional Disease Information for MTO1
- Genetic Association Database
- (GAD)
- Human Genome Epidemiology Navigator
- (HuGE)
- ATLAS of Genetics and Cytogenetics in Oncology and Haematology
No data available for Genatlas for MTO1 Gene
Publications for MTO1 Gene
- Mutations of the mitochondrial-tRNA modifier MTO1 cause hypertrophic cardiomyopathy and lactic acidosis. (PMID: 22608499) Ghezzi D … Zeviani M (American journal of human genetics 2012) 2 3 4 54
- Study of modifiers factors associated to mitochondrial mutations in individuals with hearing impairment. (PMID: 19338775) de Moraes VC … Sartorato EL (Biochemical and biophysical research communications 2009) 3 23 41 54
- Isolation and characterization of the putative nuclear modifier gene MTO1 involved in the pathogenesis of deafness-associated mitochondrial 12 S rRNA A1555G mutation. (PMID: 12011058) Li X … Guan MX (The Journal of biological chemistry 2002) 2 3 4 54
- Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression. (PMID: 20877624) Hendrickson SL … O'Brien SJ (PloS one 2010) 3 41 54
- Genetic association analysis of 13 nuclear-encoded mitochondrial candidate genes with type II diabetes mellitus: the DAMAGE study. (PMID: 19209188) Reiling E … Dekker JM (European journal of human genetics : EJHG 2009) 3 41 54
ExternalLinks
Products for MTO1 Gene
- Custom Antibody ServicesOriGene Antibodies for MTO1
- Browse OriGene ELISA Kits
- Custom Assay Services
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- Origene shrna, sirna, and RNAi products in human, mouse, rat for MTO1
- Browse OriGene Inhibitory RNA Products For MTO1
- OriGene qPCR primer pairs for MTO1
- OriGene qPCR primer pairs and template standards for MTO1
- OriGene CRISPR knockouts for MTO1
- MG206766
- MG216427
- MR206766
- MR206766L3
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- RC203738
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- RR202264
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- RC203738L1V
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- RC222884L3V
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- RC226122L3V
- RC226122L4V
- RR202264L3V
- RR202264L4V
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For MTO1
- Sino Biological Human cDNA Clone for MTO1
- Browse Sino Biological Recombinant Proteins
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- High-throughput Antibody Production Service
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- Epitope Tag Antibodies & Reporter Protein Antibodies
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- Novus Biologicals Antibodies for MTO1
- Novus Biologicals proteins and lysates for MTO1
- Browse Antibodies
- Browse Peptides and Proteins
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- Taconic Biosciences Mouse Models for MTO1
- Find your next knockout model in the Taconic Knockout Repository
- Genetically Engineered Models Available Immediately
- Humanized Mice
- Invitrogen Antibodies for MTO1 (AFLGC-MTO1)
- VectorBuilder Custom and pre-made DNA vectors for MTO1 (ie. gene expression, shRNA knockdown, CRISPR)
- VectorBuilder Viral vectors for MTO1 (ie. lentivirus, AAV, adenovirus)
- VectorBuilder CRISPR vectors for MTO1 (ie. knockout, knockin, CRISPRa, CRISPRi)
- VectorBuilder Virus packaging for MTO1 CRISPR vectors (ie. lentivirus, AAV, adenovirus)
- VectorBuilder Stable cell line generation for MTO1
- antibodies-online: Show 7 available MTO1 Antibodies ranked by validation data
- antibodies-online: Search results for available MTO1 related products ranked by validation data
- antibodies-online: Search results for available MTO1 related products ranked by validation data
- Santa Cruz Biotechnology (SCBT) Antibodies for MTO1
- Search Santa Cruz Biotechnology (SCBT) for MTO1 siRNA/shRNA
- Santa Cruz Biotechnology (SCBT) CRISPR for MTO1
- Horizon Cell Lines for MTO1
- genomics-online: cdna clones - Search results for available MTO1 gene related products
- orf clones - Search results for available MTO1 gene related products
- genomics-online: gRNA clones - Search results for available MTO1 gene related products
- genomics-online: primer clones - Search results for available MTO1 gene related products
- genomics-online: shRNA clones - Search results for available MTO1 gene related products
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for MTO1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for MTO1
- Search GeneCopoeia for miRNA 3'UTR Target clone products for MTO1
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for MTO1
- Biorbyt antibodies for MTO1
Sources for MTO1 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
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- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) H-invDB
- (47) HORDE
- (48) HUGE
- (49) IMGT
- (50) Leiden
- (51) miRBase
- (52) DME
- (53) OriGene
- (54) PubMed
- (55) R&D Systems
- (56) TGDB
- (57) Tocris
- (58) Abcam
- (59) Novus Biologicals
- (60) ProSpec
- (61) Sino Biological
- (62) GenScript
- (63) Qiagen
- (64) OCA
- (65) Proteopedia
- (66) MOPED
- (67) neXtProt
- (68) Reactome
- (69) GeneGo (Thomson Reuters)
- (70) DISEASES
- (71) SIMAP
- (72) GenomeRNAi
- (73) LifeMap
- (74) miRTarBase
- (75) MalaCards
- (76) Invitrogen
- (77) BitterDB
- (78) ESI-BIO
- (79) RefSeq
- (80) BioSystems
- (81) MaxQB
- (82) IUPHAR
- (83) BioGPS
- (84) Illumina
- (85) COMPARTMENTS
- (86) HOMER
- (87) PaxDb
- (88) ApexBio
- (89) Addgene
- (90) antibodies-online
- (91) CYP
- (92) NONCODE
- (93) TreeFam
- (94) PathCards
- (95) GeneReviews
- (96) GeneTex
- (97) Taconic Biosciences
- (98) GTEx
- (99) ProteomicsDB
- (100) SCBT
- (101) DGIdb
- (102) ClinicalTrials
- (103) RVIS
- (104) SIGNOR
- (105) diseasecard
- (106) NIH Rare Diseases
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- (110) Disease Ontology
- (111) Genetics Home Reference
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- (116) NCBI Bookshelf
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- (133) dbSUPER
- (134) TISSUES
- (135) Gene ORGANizer
- (136) abm
- (137) Human Protein Atlas
- (138) GWAS Catalog
- (139) Monarch Initiative
- (140) DataMed
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- (142) genomics-online
- (143) UCNEbase
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- (152) LOVD
- (153) miR2Disease
- (154) DiseaseEnhancer
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- (156) Biorbyt
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- (158) Mastermind
- (159) CTD^2 Dashboard
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- (163) Bio Basic
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