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MTND1P20 Gene(Pseudogene)

Mitochondrially Encoded NADH:Ubiquinone Oxidoreductase Core Subunit 1 Pseudogene 20

GCID:
GC10M069595
GIFtS:
9

Aliases for MTND1P20 Gene

Subcategory (RNA class) for MTND1P20 Gene

lncRNA

Aliases for MTND1P20 Gene

  • Mitochondrially Encoded NADH:Ubiquinone Oxidoreductase Core Subunit 1 Pseudogene 20 2 3 5
  • MT-ND1 Pseudogene 20 2 3

External Ids for MTND1P20 Gene

ORGUL Members for MTND1P20 Gene

Previous GeneCards Identifiers for MTND1P20 Gene

  • GC00U933510
  • GC10M071407
  • GC10M071411
  • GC10M071416
  • GC10M071421
  • GC10M071430

Summaries for MTND1P20 Gene

GeneCards Summary for MTND1P20 Gene

MTND1P20 (Mitochondrially Encoded NADH:Ubiquinone Oxidoreductase Core Subunit 1 Pseudogene 20) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for MTND1P20 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MTND1P20 Gene

Genomics for MTND1P20 Gene

GeneHancer (GH) Regulatory Elements for MTND1P20 Gene

Promoters and enhancers for MTND1P20 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J069595 Enhancer 0.2 FANTOM5 650.7 +0.5 456 0.2 MTND1P20 MTND2P15 FAM241B LOC101929021 NEUROG3
GH10J070458 Enhancer 1 Ensembl ENCODE 14.6 -862.4 -862421 1.7 HDGF KLF17 ZNF2 ZNF335 GLIS2 EGR1 ZFP91 FOS EGR2 ZNF680 PALD1 LOC105378349 MTCO1P23 MTND1P20 MTND2P15 NPFFR1 YY1P1
GH10J069629 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.3 -33.8 -33787 1.2 ATF1 ARNT SIN3A GLI4 ZNF2 ZBTB7B ETS1 GLIS2 E2F8 ZNF143 FAM241B CCAR1 SAR1A DDX50 MTND1P20
GH10J069626 Enhancer 0.2 FANTOM5 0.3 -30.6 -30564 0.3 FAM241B MTND1P20
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MTND1P20 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MTND1P20 Gene

Genomic Locations for MTND1P20 Gene
chr10:69,595,487-69,596,436
(GRCh38/hg38)
Size:
950 bases
Orientation:
Minus strand
chr10:71,355,243-71,356,192
(GRCh37/hg19)
Size:
950 bases
Orientation:
Minus strand

Genomic View for MTND1P20 Gene

Genes around MTND1P20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MTND1P20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MTND1P20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MTND1P20 Gene

Function for MTND1P20 Gene

Phenotypes From GWAS Catalog for MTND1P20 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MTND1P20 Gene

Localization for MTND1P20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MTND1P20 Gene

Pathways & Interactions for MTND1P20 Gene

SuperPathways for MTND1P20 Gene

No Data Available

Interacting Proteins for MTND1P20 Gene

Gene Ontology (GO) - Biological Process for MTND1P20 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MTND1P20 Gene

Drugs & Compounds for MTND1P20 Gene

No Compound Related Data Available

Transcripts for MTND1P20 Gene

mRNA/cDNA for MTND1P20 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MTND1P20 Gene

No ASD Table

Relevant External Links for MTND1P20 Gene

GeneLoc Exon Structure for
MTND1P20
ECgene alternative splicing isoforms for
MTND1P20

Expression for MTND1P20 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MTND1P20 Gene

NURSA nuclear receptor signaling pathways regulating expression of MTND1P20 Gene:

MTND1P20
genes like me logo Genes that share expression patterns with MTND1P20: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MTND1P20 Gene

Orthologs for MTND1P20 Gene

Evolution for MTND1P20 Gene

ENSEMBL:
Gene Tree for MTND1P20 (if available)
TreeFam:
Gene Tree for MTND1P20 (if available)

No data available for Orthologs for MTND1P20 Gene

Paralogs for MTND1P20 Gene

No data available for Paralogs for MTND1P20 Gene

Variants for MTND1P20 Gene

Additional Variant Information for MTND1P20 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MTND1P20

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MTND1P20 Gene

Disorders for MTND1P20 Gene

No disorders were found for MTND1P20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MTND1P20 Gene

Publications for MTND1P20 Gene

No publications were found for MTND1P20 Gene.

Products for MTND1P20 Gene

Sources for MTND1P20 Gene

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