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Aliases for MTDHP4 Gene

Subcategory (RNA class) for MTDHP4 Gene

lncRNA

Aliases for MTDHP4 Gene

  • Metadherin Pseudogene 4 2 3 5

External Ids for MTDHP4 Gene

ORGUL Members for MTDHP4 Gene

Summaries for MTDHP4 Gene

GeneCards Summary for MTDHP4 Gene

MTDHP4 (Metadherin Pseudogene 4) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for MTDHP4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MTDHP4 Gene

Genomics for MTDHP4 Gene

GeneHancer (GH) Regulatory Elements for MTDHP4 Gene

Promoters and enhancers for MTDHP4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I021709 Enhancer 0.2 FANTOM5 550.8 -0.2 -209 0.3 MTDHP4 ZNF100 GC19M022319
GH19I021766 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 11.5 +57.7 57692 2 PKNOX1 ATF1 ARID4B SIN3A DMAP1 YY1 POLR2B E2F8 ZNF143 FOS ZNF100 PIR33243 RPL7AP10 MTDHP4 LOC641367 ZNF431
GH19I021850 Promoter/Enhancer 1.3 EPDnew ENCODE 8.8 +142.2 142209 2.2 HDAC1 PKNOX1 ATF1 ARID4B ZNF76 SIN3A FEZF1 YY1 ZNF335 SCRT2 ZNF43 MTDHP4 ZNF100 VN1R84P GC19P021843
GH19I021396 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 4.4 -312.1 -312102 2 PKNOX1 ATF1 ARID4B DMAP1 ZNF48 YY1 ETS1 POLR2B E2F8 ZNF207 ZNF493 LOC105372321 ZNF100 RPL7AP10 ZNF431 LOC641367 ZNF43 ZNF66 MTDHP4 ENSG00000269237
GH19I021750 Enhancer 0.4 ENCODE 14.8 +42.0 41958 1.4 ZBTB33 ZKSCAN1 LOC641367 ZNF100 MTDHP4 PIR33243
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MTDHP4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MTDHP4 Gene

Genomic Locations for MTDHP4 Gene
chr19:21,709,522-21,710,191
(GRCh38/hg38)
Size:
670 bases
Orientation:
Plus strand
chr19:21,892,324-21,892,993
(GRCh37/hg19)

Genomic View for MTDHP4 Gene

Genes around MTDHP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MTDHP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MTDHP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MTDHP4 Gene

Proteins for MTDHP4 Gene

Post-translational modifications for MTDHP4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MTDHP4 Gene

Domains & Families for MTDHP4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MTDHP4 Gene

Function for MTDHP4 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MTDHP4 Gene

Localization for MTDHP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MTDHP4 Gene

Pathways & Interactions for MTDHP4 Gene

SuperPathways for MTDHP4 Gene

No Data Available

Interacting Proteins for MTDHP4 Gene

Gene Ontology (GO) - Biological Process for MTDHP4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MTDHP4 Gene

Drugs & Compounds for MTDHP4 Gene

No Compound Related Data Available

Transcripts for MTDHP4 Gene

mRNA/cDNA for MTDHP4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MTDHP4 Gene

No ASD Table

Relevant External Links for MTDHP4 Gene

GeneLoc Exon Structure for
MTDHP4
ECgene alternative splicing isoforms for
MTDHP4

Expression for MTDHP4 Gene

NURSA nuclear receptor signaling pathways regulating expression of MTDHP4 Gene:

MTDHP4
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MTDHP4 Gene

Orthologs for MTDHP4 Gene

Evolution for MTDHP4 Gene

ENSEMBL:
Gene Tree for MTDHP4 (if available)
TreeFam:
Gene Tree for MTDHP4 (if available)

No data available for Orthologs for MTDHP4 Gene

Paralogs for MTDHP4 Gene

No data available for Paralogs for MTDHP4 Gene

Variants for MTDHP4 Gene

Additional Variant Information for MTDHP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MTDHP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MTDHP4 Gene

Disorders for MTDHP4 Gene

No disorders were found for MTDHP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MTDHP4 Gene

Publications for MTDHP4 Gene

No publications were found for MTDHP4 Gene.

Products for MTDHP4 Gene

Sources for MTDHP4 Gene

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