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Aliases for MTDHP1 Gene

Subcategory (RNA class) for MTDHP1 Gene

lncRNA

Aliases for MTDHP1 Gene

  • Metadherin Pseudogene 1 2 3 5

External Ids for MTDHP1 Gene

ORGUL Members for MTDHP1 Gene

Summaries for MTDHP1 Gene

GeneCards Summary for MTDHP1 Gene

MTDHP1 (Metadherin Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for MTDHP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MTDHP1 Gene

Genomics for MTDHP1 Gene

GeneHancer (GH) Regulatory Elements for MTDHP1 Gene

Promoters and enhancers for MTDHP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J064945 Enhancer 1.1 ENCODE dbSUPER 0.7 -2.3 -2292 0.2 PKNOX1 ATF1 ARNT NCOA2 TCF12 CBX5 GATA2 ATF7 NCOA1 REST LOC441239 LOC105375328 MTDHP1
GH07J064944 Enhancer 0.9 dbSUPER 0.7 -2.1 -2075 0.1 HDGF PKNOX1 ATF1 ARNT NCOA2 TCF12 CBX5 GATA2 ZFP91 ATF7 LOC441239 MTDHP1 LOC105375328
GH07J064950 Enhancer 0.4 dbSUPER 0.7 -3.7 -3694 0.2 CTCF ZBTB48 KLF16 LOC105375328 MTDHP1
GH07J064946 Enhancer 0.2 dbSUPER 0.7 -3.5 -3452 0.1 LOC105375328 MTDHP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MTDHP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MTDHP1 Gene

Genomic Locations for MTDHP1 Gene
chr7:64,942,143-64,942,926
(GRCh38/hg38)
Size:
784 bases
Orientation:
Minus strand
chr7:64,402,521-64,403,304
(GRCh37/hg19)
Size:
784 bases
Orientation:
Minus strand

Genomic View for MTDHP1 Gene

Genes around MTDHP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MTDHP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MTDHP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MTDHP1 Gene

Function for MTDHP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MTDHP1 Gene

Localization for MTDHP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MTDHP1 Gene

Pathways & Interactions for MTDHP1 Gene

SuperPathways for MTDHP1 Gene

No Data Available

Interacting Proteins for MTDHP1 Gene

Gene Ontology (GO) - Biological Process for MTDHP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MTDHP1 Gene

Drugs & Compounds for MTDHP1 Gene

No Compound Related Data Available

Transcripts for MTDHP1 Gene

mRNA/cDNA for MTDHP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MTDHP1 Gene

No ASD Table

Relevant External Links for MTDHP1 Gene

GeneLoc Exon Structure for
MTDHP1
ECgene alternative splicing isoforms for
MTDHP1

Expression for MTDHP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of MTDHP1 Gene:

MTDHP1
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MTDHP1 Gene

Orthologs for MTDHP1 Gene

Evolution for MTDHP1 Gene

ENSEMBL:
Gene Tree for MTDHP1 (if available)
TreeFam:
Gene Tree for MTDHP1 (if available)

No data available for Orthologs for MTDHP1 Gene

Paralogs for MTDHP1 Gene

No data available for Paralogs for MTDHP1 Gene

Variants for MTDHP1 Gene

Additional Variant Information for MTDHP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MTDHP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MTDHP1 Gene

Disorders for MTDHP1 Gene

No disorders were found for MTDHP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MTDHP1 Gene

Publications for MTDHP1 Gene

No publications were found for MTDHP1 Gene.

Products for MTDHP1 Gene

Sources for MTDHP1 Gene

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