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Aliases for MTCYBP40 Gene

Subcategory (RNA class) for MTCYBP40 Gene

lncRNA

Aliases for MTCYBP40 Gene

  • Mitochondrially Encoded Cytochrome B Pseudogene 40 2 3 5

External Ids for MTCYBP40 Gene

ORGUL Members for MTCYBP40 Gene

Previous GeneCards Identifiers for MTCYBP40 Gene

  • GC00U936686

Summaries for MTCYBP40 Gene

GeneCards Summary for MTCYBP40 Gene

MTCYBP40 (Mitochondrially Encoded Cytochrome B Pseudogene 40) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for MTCYBP40 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MTCYBP40 Gene

Genomics for MTCYBP40 Gene

GeneHancer (GH) Regulatory Elements for MTCYBP40 Gene

Promoters and enhancers for MTCYBP40 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J097547 Enhancer 0.9 Ensembl ENCODE 0.1 +130.4 130390 1.4 PKNOX1 BACH1 BMI1 BATF IRF4 POLR2A EED ATF7 ETV6 IKZF2 LINC02234 LINC01340 MTCYBP40
GH05J097627 Enhancer 0.4 ENCODE 0.2 +50.1 50068 2.1 RFX1 CHD2 LINC02234 MTCYBP40 LINC01340
GH05J097534 Enhancer 0.8 Ensembl ENCODE 0.1 +144.3 144280 0.4 CTCF FOXA2 HLF TRIM22 CEBPB CEBPG RAD21 CEBPA SMC3 ZNF143 LINC01340 MTCYBP40
GH05J097554 Enhancer 0.4 ENCODE 0.1 +123.3 123276 1.5 STAT1 ZNF623 LINC02234 LINC01340 MTCYBP40
GH05J097576 Enhancer 0.2 ENCODE 0.1 +101.7 101710 0.5 LINC02234 LINC01340 MTCYBP40
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MTCYBP40 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MTCYBP40 Gene

Genomic Locations for MTCYBP40 Gene
chr5:97,677,547-97,678,681
(GRCh38/hg38)
Size:
1,135 bases
Orientation:
Minus strand
chr5:97,013,251-97,014,385
(GRCh37/hg19)
Size:
1,135 bases
Orientation:
Minus strand

Genomic View for MTCYBP40 Gene

Genes around MTCYBP40 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MTCYBP40 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MTCYBP40 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MTCYBP40 Gene

Function for MTCYBP40 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MTCYBP40 Gene

Localization for MTCYBP40 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MTCYBP40 Gene

Pathways & Interactions for MTCYBP40 Gene

SuperPathways for MTCYBP40 Gene

No Data Available

Interacting Proteins for MTCYBP40 Gene

Gene Ontology (GO) - Biological Process for MTCYBP40 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MTCYBP40 Gene

Drugs & Compounds for MTCYBP40 Gene

No Compound Related Data Available

Transcripts for MTCYBP40 Gene

mRNA/cDNA for MTCYBP40 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MTCYBP40 Gene

No ASD Table

Relevant External Links for MTCYBP40 Gene

GeneLoc Exon Structure for
MTCYBP40
ECgene alternative splicing isoforms for
MTCYBP40

Expression for MTCYBP40 Gene

NURSA nuclear receptor signaling pathways regulating expression of MTCYBP40 Gene:

MTCYBP40
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MTCYBP40 Gene

Orthologs for MTCYBP40 Gene

Evolution for MTCYBP40 Gene

ENSEMBL:
Gene Tree for MTCYBP40 (if available)
TreeFam:
Gene Tree for MTCYBP40 (if available)

No data available for Orthologs for MTCYBP40 Gene

Paralogs for MTCYBP40 Gene

No data available for Paralogs for MTCYBP40 Gene

Variants for MTCYBP40 Gene

Additional Variant Information for MTCYBP40 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MTCYBP40

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MTCYBP40 Gene

Disorders for MTCYBP40 Gene

No disorders were found for MTCYBP40 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MTCYBP40 Gene

Publications for MTCYBP40 Gene

No publications were found for MTCYBP40 Gene.

Products for MTCYBP40 Gene

Sources for MTCYBP40 Gene

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