Aliases for MTCYBP28 Gene

Aliases for MTCYBP28 Gene

  • MT-CYB Pseudogene 28 2 3 5
  • Mitochondrially Encoded Cytochrome B Pseudogene 28 2 3
  • MTCYBP28 5

External Ids for MTCYBP28 Gene

Previous GeneCards Identifiers for MTCYBP28 Gene

  • GC00U936513

Summaries for MTCYBP28 Gene

GeneCards Summary for MTCYBP28 Gene

MTCYBP28 (MT-CYB Pseudogene 28) is a Pseudogene.

Additional gene information for MTCYBP28 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MTCYBP28 Gene

Genomics for MTCYBP28 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MTCYBP28 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J082138 Promoter/Enhancer 1.2 FANTOM5 Ensembl ENCODE 5.1 -17.3 -17296 1.5 ZNF217 MBD2 CTBP1 YY1 GATA3 SMARCE1 FOXA1 ZBTB33 RFX1 NCOA3 ENSG00000261235 HSALNG0113031 piR-33432-223 piR-33605-192 MPHOSPH6 SDR42E1 MTCYBP28 HSD17B2
GH16J082111 Enhancer 0.7 Ensembl ENCODE 0.4 +9.8 9778 1.6 CEBPB CTBP1 DPF2 CREB1 FOSL2 FOS MNT CEBPG SDR42E1 MPHOSPH6 MTCYBP28 lnc-MPHOSPH6-6 piR-46381-032 ENSG00000261235 HSD17B2
GH16J082109 Enhancer 0.2 FANTOM5 0.4 +12.2 12244 0.2 piR-46381-032 MTCYBP28 lnc-MPHOSPH6-6 ENSG00000261235 MPHOSPH6 HSD17B2
GH16J082108 Enhancer 0.2 FANTOM5 0.4 +12.8 12783 0.1 piR-46381-032 MTCYBP28 lnc-MPHOSPH6-6 ENSG00000261235 MPHOSPH6 HSD17B2
GH16J082113 Enhancer 0.2 Ensembl 0.4 +7.7 7668 1 MTCYBP28 lnc-MPHOSPH6-6 piR-46381-032 ENSG00000261235 MPHOSPH6 HSD17B2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MTCYBP28 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MTCYBP28 Gene

Latest Assembly
chr16:82,120,638-82,121,769
(GRCh38/hg38)
Size:
1,132 bases
Orientation:
Minus strand

Previous Assembly
chr16:82,154,243-82,155,374
(GRCh37/hg19 by Entrez Gene)
Size:
1,132 bases
Orientation:
Minus strand

chr16:82,154,243-82,155,374
(GRCh37/hg19 by Ensembl)
Size:
1,132 bases
Orientation:
Minus strand

Genomic View for MTCYBP28 Gene

Genes around MTCYBP28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MTCYBP28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MTCYBP28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MTCYBP28 Gene

Proteins for MTCYBP28 Gene

Post-translational modifications for MTCYBP28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MTCYBP28 Gene

Domains & Families for MTCYBP28 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MTCYBP28 Gene

Function for MTCYBP28 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MTCYBP28 Gene

Localization for MTCYBP28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MTCYBP28 Gene

Pathways & Interactions for MTCYBP28 Gene

PathCards logo

SuperPathways for MTCYBP28 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MTCYBP28 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MTCYBP28 Gene

Drugs & Compounds for MTCYBP28 Gene

No Compound Related Data Available

Transcripts for MTCYBP28 Gene

mRNA/cDNA for MTCYBP28 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MTCYBP28 Gene

No ASD Table

Relevant External Links for MTCYBP28 Gene

GeneLoc Exon Structure for
MTCYBP28

Expression for MTCYBP28 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MTCYBP28 Gene

Orthologs for MTCYBP28 Gene

Evolution for MTCYBP28 Gene

ENSEMBL:
Gene Tree for MTCYBP28 (if available)
TreeFam:
Gene Tree for MTCYBP28 (if available)

No data available for Orthologs for MTCYBP28 Gene

Paralogs for MTCYBP28 Gene

No data available for Paralogs for MTCYBP28 Gene

Variants for MTCYBP28 Gene

Additional Variant Information for MTCYBP28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MTCYBP28

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MTCYBP28 Gene

Disorders for MTCYBP28 Gene

No disorders were found for MTCYBP28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MTCYBP28 Gene

Publications for MTCYBP28 Gene

No publications were found for MTCYBP28 Gene.

No data available for Mastermind for MTCYBP28 Gene

Products for MTCYBP28 Gene

Sources for MTCYBP28 Gene