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Aliases for MTCYBP28 Gene

Subcategory (RNA class) for MTCYBP28 Gene

lncRNA

Aliases for MTCYBP28 Gene

  • Mitochondrially Encoded Cytochrome B Pseudogene 28 2 3 5
  • MT-CYB Pseudogene 28 2

External Ids for MTCYBP28 Gene

ORGUL Members for MTCYBP28 Gene

Previous GeneCards Identifiers for MTCYBP28 Gene

  • GC00U936513

Summaries for MTCYBP28 Gene

GeneCards Summary for MTCYBP28 Gene

MTCYBP28 (Mitochondrially Encoded Cytochrome B Pseudogene 28) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for MTCYBP28 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MTCYBP28 Gene

Genomics for MTCYBP28 Gene

GeneHancer (GH) Regulatory Elements for MTCYBP28 Gene

Promoters and enhancers for MTCYBP28 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I082138 Enhancer 1.1 FANTOM5 Ensembl ENCODE 5.1 -17.2 -17195 1.3 NCOA3 GTF2F1 CLOCK FOXA2 CTBP1 GATA3 EGR1 SMARCE1 RFX1 FOXA1 LOC105371363 MPHOSPH6 SDR42E1 MTCYBP28
GH16I082082 Enhancer 1.2 ENCODE dbSUPER 0.3 +37.8 37820 3.6 FOXA2 MLX ARID4B FEZF1 IRF4 ETS1 YY1 TCF12 SLC30A9 ATF7 MTCYBP28 HSD17B2 LOC105371363
GH16I082033 Promoter/Enhancer 1.8 EPDnew FANTOM5 Ensembl ENCODE 0.2 +85.9 85916 5.1 ELF3 FOXA2 ARID4B DMAP1 RAD21 RARA YY1 RXRA MXD4 ELF1 HSD17B2 SDR42E1 MTCYBP28
GH16I082111 Enhancer 0.6 ENCODE 0.4 +9.8 9802 1.6 CEBPB DPF2 MNT CEBPG CTBP1 GATA3 CREB1 FOS FOSL2 SDR42E1 MPHOSPH6 MTCYBP28 LOC105371363 HSD17B2
GH16I082061 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.2 +58.6 58564 2.7 ATF1 FOXA2 RAD21 RARA ATF7 CREM KLF11 RXRA CEBPB TGIF2 HSD17B2 MTCYBP28 LOC105371363
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MTCYBP28 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MTCYBP28 Gene

Genomic Locations for MTCYBP28 Gene
chr16:82,120,638-82,121,769
(GRCh38/hg38)
Size:
1,132 bases
Orientation:
Minus strand
chr16:82,154,243-82,155,374
(GRCh37/hg19)

Genomic View for MTCYBP28 Gene

Genes around MTCYBP28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MTCYBP28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MTCYBP28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MTCYBP28 Gene

Proteins for MTCYBP28 Gene

Post-translational modifications for MTCYBP28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MTCYBP28 Gene

Domains & Families for MTCYBP28 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MTCYBP28 Gene

Function for MTCYBP28 Gene

Phenotypes From GWAS Catalog for MTCYBP28 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MTCYBP28 Gene

Localization for MTCYBP28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MTCYBP28 Gene

Pathways & Interactions for MTCYBP28 Gene

SuperPathways for MTCYBP28 Gene

No Data Available

Interacting Proteins for MTCYBP28 Gene

Gene Ontology (GO) - Biological Process for MTCYBP28 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MTCYBP28 Gene

Drugs & Compounds for MTCYBP28 Gene

No Compound Related Data Available

Transcripts for MTCYBP28 Gene

mRNA/cDNA for MTCYBP28 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MTCYBP28 Gene

No ASD Table

Relevant External Links for MTCYBP28 Gene

GeneLoc Exon Structure for
MTCYBP28
ECgene alternative splicing isoforms for
MTCYBP28

Expression for MTCYBP28 Gene

NURSA nuclear receptor signaling pathways regulating expression of MTCYBP28 Gene:

MTCYBP28
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MTCYBP28 Gene

Orthologs for MTCYBP28 Gene

Evolution for MTCYBP28 Gene

ENSEMBL:
Gene Tree for MTCYBP28 (if available)
TreeFam:
Gene Tree for MTCYBP28 (if available)

No data available for Orthologs for MTCYBP28 Gene

Paralogs for MTCYBP28 Gene

No data available for Paralogs for MTCYBP28 Gene

Variants for MTCYBP28 Gene

Additional Variant Information for MTCYBP28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MTCYBP28

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MTCYBP28 Gene

Disorders for MTCYBP28 Gene

No disorders were found for MTCYBP28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MTCYBP28 Gene

Publications for MTCYBP28 Gene

No publications were found for MTCYBP28 Gene.

Products for MTCYBP28 Gene

Sources for MTCYBP28 Gene

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