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Aliases for MTCO3P40 Gene

Subcategory (RNA class) for MTCO3P40 Gene

lncRNA

Aliases for MTCO3P40 Gene

  • Mitochondrially Encoded Cytochrome C Oxidase III Pseudogene 40 2 3 5
  • MT-CO3 Pseudogene 40 2

External Ids for MTCO3P40 Gene

ORGUL Members for MTCO3P40 Gene

Previous GeneCards Identifiers for MTCO3P40 Gene

  • GC09M082428
  • GC09M082429

Summaries for MTCO3P40 Gene

GeneCards Summary for MTCO3P40 Gene

MTCO3P40 (Mitochondrially Encoded Cytochrome C Oxidase III Pseudogene 40) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for MTCO3P40 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MTCO3P40 Gene

Genomics for MTCO3P40 Gene

GeneHancer (GH) Regulatory Elements for MTCO3P40 Gene

Promoters and enhancers for MTCO3P40 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I082423 Enhancer 0.5 ENCODE 0.8 +4.1 4134 0.1 RXRA HNF4G HNF4A RAD21 MTCO3P40 ENSG00000225085 ENSG00000228430 LOC105376107
GH09I082410 Enhancer 0.7 ENCODE 0.4 +17.5 17478 0 FEZF1 BATF IRF4 RELA CTBP1 GATA3 FOS FOSL2 SMARCE1 DPF2 ENSG00000225085 MTCO3P40 ENSG00000228430 LOC105376107
GH09I082424 Enhancer 0.2 ENCODE 0.8 +3.1 3080 0.9 MTCO3P40 ENSG00000225085 LOC105376107 ENSG00000228430
GH09I082411 Enhancer 0.4 ENCODE 0.4 +16.9 16924 0.2 HNF4A FOXA1 ENSG00000225085 MTCO3P40 ENSG00000228430 LOC105376107
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MTCO3P40 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MTCO3P40 Gene

Genomic Locations for MTCO3P40 Gene
chr9:82,427,350-82,428,025
(GRCh38/hg38)
Size:
676 bases
Orientation:
Minus strand
chr9:85,042,265-85,042,940
(GRCh37/hg19)

Genomic View for MTCO3P40 Gene

Genes around MTCO3P40 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MTCO3P40 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MTCO3P40 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MTCO3P40 Gene

Proteins for MTCO3P40 Gene

Post-translational modifications for MTCO3P40 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MTCO3P40 Gene

Domains & Families for MTCO3P40 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MTCO3P40 Gene

Function for MTCO3P40 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MTCO3P40 Gene

Localization for MTCO3P40 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MTCO3P40 Gene

Pathways & Interactions for MTCO3P40 Gene

SuperPathways for MTCO3P40 Gene

No Data Available

Interacting Proteins for MTCO3P40 Gene

Gene Ontology (GO) - Biological Process for MTCO3P40 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MTCO3P40 Gene

Drugs & Compounds for MTCO3P40 Gene

No Compound Related Data Available

Transcripts for MTCO3P40 Gene

mRNA/cDNA for MTCO3P40 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MTCO3P40 Gene

No ASD Table

Relevant External Links for MTCO3P40 Gene

GeneLoc Exon Structure for
MTCO3P40
ECgene alternative splicing isoforms for
MTCO3P40

Expression for MTCO3P40 Gene

NURSA nuclear receptor signaling pathways regulating expression of MTCO3P40 Gene:

MTCO3P40
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MTCO3P40 Gene

Orthologs for MTCO3P40 Gene

Evolution for MTCO3P40 Gene

ENSEMBL:
Gene Tree for MTCO3P40 (if available)
TreeFam:
Gene Tree for MTCO3P40 (if available)

No data available for Orthologs for MTCO3P40 Gene

Paralogs for MTCO3P40 Gene

No data available for Paralogs for MTCO3P40 Gene

Variants for MTCO3P40 Gene

Additional Variant Information for MTCO3P40 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MTCO3P40

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MTCO3P40 Gene

Disorders for MTCO3P40 Gene

No disorders were found for MTCO3P40 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MTCO3P40 Gene

Publications for MTCO3P40 Gene

No publications were found for MTCO3P40 Gene.

Products for MTCO3P40 Gene

Sources for MTCO3P40 Gene

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