Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MTCO2P1 Gene

Subcategory (RNA class) for MTCO2P1 Gene


Aliases for MTCO2P1 Gene

  • Mitochondrially Encoded Cytochrome C Oxidase II Pseudogene 1 2 3 5
  • MT-CO2 Pseudogene 1 2 3
  • MTCO2 Pseudogene 1 2 3
  • MTCO2 Like 2 3
  • Cytochrome C Oxidase Subunit II (MTCO2) Pseudogene 3
  • Cytochrome C Oxidase II-Like 2
  • DJ342K12.1 3
  • MTCO2L 3

External Ids for MTCO2P1 Gene

ORGUL Members for MTCO2P1 Gene

Previous HGNC Symbols for MTCO2P1 Gene

  • MTCO2L

Previous GeneCards Identifiers for MTCO2P1 Gene

  • GC20M058991
  • GC20M055777

Summaries for MTCO2P1 Gene

GeneCards Summary for MTCO2P1 Gene

MTCO2P1 (Mitochondrially Encoded Cytochrome C Oxidase II Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for MTCO2P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MTCO2P1 Gene

Genomics for MTCO2P1 Gene

GeneHancer (GH) Regulatory Elements for MTCO2P1 Gene

Promoters and enhancers for MTCO2P1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20I060414 Enhancer 0.2 dbSUPER 550.8 +0.3 278 1.2 MTCO2P1 MIR646 LOC105372697 MIR646HG
GH20I060410 Enhancer 0.4 dbSUPER 0.8 +2.7 2719 3.1 PKNOX1 KLF4 MAFK MIR646 MTCO2P1 LOC105372697 MIR646HG
GH20I060416 Enhancer 0.4 dbSUPER 0.8 -2.5 -2478 1.1 NONO BMI1 E4F1 MTCO2P1 GC20M060452 MIR646HG
GH20I060402 Enhancer 0.6 ENCODE dbSUPER 0.4 +11.6 11580 1.6 CREB1 BATF RUNX3 MTCO2P1 LOC105372697 MIR646HG
GH20I060418 Enhancer 0.2 dbSUPER 0.8 -3.8 -3765 0.6 MTCO2P1 GC20M060452 MIR646HG
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MTCO2P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MTCO2P1 Gene

Genomic Locations for MTCO2P1 Gene
477 bases
Minus strand

Genomic View for MTCO2P1 Gene

Genes around MTCO2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MTCO2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MTCO2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MTCO2P1 Gene

Proteins for MTCO2P1 Gene

Post-translational modifications for MTCO2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MTCO2P1 Gene

Domains & Families for MTCO2P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MTCO2P1 Gene

Function for MTCO2P1 Gene

Phenotypes From GWAS Catalog for MTCO2P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MTCO2P1 Gene

Localization for MTCO2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MTCO2P1 Gene

Pathways & Interactions for MTCO2P1 Gene

SuperPathways for MTCO2P1 Gene

No Data Available

Interacting Proteins for MTCO2P1 Gene

Gene Ontology (GO) - Biological Process for MTCO2P1 Gene


No data available for Pathways by source and SIGNOR curated interactions for MTCO2P1 Gene

Drugs & Compounds for MTCO2P1 Gene

No Compound Related Data Available

Transcripts for MTCO2P1 Gene

mRNA/cDNA for MTCO2P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MTCO2P1 Gene

No ASD Table

Relevant External Links for MTCO2P1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MTCO2P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MTCO2P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of MTCO2P1 Gene:

genes like me logo Genes that share expression patterns with MTCO2P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MTCO2P1 Gene

Orthologs for MTCO2P1 Gene

Evolution for MTCO2P1 Gene

Gene Tree for MTCO2P1 (if available)
Gene Tree for MTCO2P1 (if available)

No data available for Orthologs for MTCO2P1 Gene

Paralogs for MTCO2P1 Gene

No data available for Paralogs for MTCO2P1 Gene

Variants for MTCO2P1 Gene

Additional Variant Information for MTCO2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MTCO2P1 Gene

Disorders for MTCO2P1 Gene

Additional Disease Information for MTCO2P1

Genetic Association Database

No disorders were found for MTCO2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MTCO2P1 Gene

Publications for MTCO2P1 Gene

  1. Genome-wide association study identifies variants associated with histologic features of nonalcoholic Fatty liver disease. (PMID: 20708005) Chalasani N … Nonalcoholic Steatohepatitis Clinical Research Network (Gastroenterology 2010) 44 58
  2. Epidermal growth factor receptor phosphorylation sites Ser991 and Tyr998 are implicated in the regulation of receptor endocytosis and phosphorylations at Ser1039 and Thr1041. (PMID: 19531499) Tong J … Moran MF (Molecular & cellular proteomics : MCP 2009) 3 58
  3. Genome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis. (PMID: 19010793) Baranzini SE … Oksenberg JR (Human molecular genetics 2009) 44 58
  4. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q … O'Donnell CJ (BMC medical genetics 2007) 44 58
  5. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan RS … Benjamin EJ (BMC medical genetics 2007) 44 58

Products for MTCO2P1 Gene

Sources for MTCO2P1 Gene

Loading form....