Aliases for MT1P3 Gene

Aliases for MT1P3 Gene

  • Metallothionein 1 Pseudogene 3 2 3 5
  • Metallothionein-Like 4 2 3
  • DJ614O4.6 2 3
  • Chromosome 20 Open Reading Frame 127 2
  • C20orf127 3
  • MT1P3 5
  • MTL4 3

External Ids for MT1P3 Gene

Previous HGNC Symbols for MT1P3 Gene

  • C20orf127
  • MTL4

Previous GeneCards Identifiers for MT1P3 Gene

  • GC20P033271
  • GC20P033809

Summaries for MT1P3 Gene

GeneCards Summary for MT1P3 Gene

MT1P3 (Metallothionein 1 Pseudogene 3) is a Pseudogene.

Additional gene information for MT1P3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MT1P3 Gene

Genomics for MT1P3 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MT1P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J035215 Enhancer 0.8 Ensembl 0.7 -2.6 -2578 1.3 ZNF629 LEF1 IKZF1 JUND CEBPB SP1 ZNF639 ZXDB CREB1 ZNF318 PROCR MT1P3 MMP24 piR-61945-304 MMP24-AS1-EDEM2 MMP24OS
GH20J035207 Enhancer 0.9 ENCODE 0.4 -9.6 -9609 1.4 HNRNPL GATAD2A CTCF REST IKZF1 ZNF692 JUND ZNF143 RXRB ZNF24 TRPC4AP RBM12 NCOA6 ERGIC3 RBM39 CPNE1 EDEM2 MMP24OS ENSG00000201151 EIF6
GH20J035225 Enhancer 0.6 ENCODE 0.4 +7.7 7674 0.1 IKZF1 PRDM1 ZSCAN4 EZH2 SP2 ZNF316 ZNF274 NR2F2 ZBTB11 ZNF335 MMP24 RBM12 RBM39 CPNE1 ENSG00000272945 MT1P3 MMP24-AS1-EDEM2 MMP24OS PROCR lnc-EIF6-1
GH20J035220 Enhancer 0.2 Ensembl 0.7 +3.0 2992 0.4 MT1P3 MMP24 PROCR MMP24-AS1-EDEM2 MMP24OS lnc-EIF6-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MT1P3 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MT1P3 Gene

Genomic Locations for MT1P3 Gene
chr20:35,218,009-35,218,185
(GRCh38/hg38)
Size:
177 bases
Orientation:
Plus strand
chr20:33,805,812-33,805,988
(GRCh37/hg19)
Size:
177 bases
Orientation:
Plus strand

Genomic View for MT1P3 Gene

Genes around MT1P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MT1P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MT1P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MT1P3 Gene

Proteins for MT1P3 Gene

Post-translational modifications for MT1P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MT1P3 Gene

Domains & Families for MT1P3 Gene

Gene Families for MT1P3 Gene

genes like me logo Genes that share domains with MT1P3: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MT1P3 Gene

Function for MT1P3 Gene

miRNA for MT1P3 Gene

miRTarBase miRNAs that target MT1P3

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for MT1P3 Gene

Localization for MT1P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MT1P3 Gene

Pathways & Interactions for MT1P3 Gene

PathCards logo

SuperPathways for MT1P3 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MT1P3 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MT1P3 Gene

Drugs & Compounds for MT1P3 Gene

No Compound Related Data Available

Transcripts for MT1P3 Gene

mRNA/cDNA for MT1P3 Gene

1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MT1P3 Gene

No ASD Table

Relevant External Links for MT1P3 Gene

GeneLoc Exon Structure for
MT1P3

Expression for MT1P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MT1P3 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for MT1P3

genes like me logo Genes that share expression patterns with MT1P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MT1P3 Gene

Orthologs for MT1P3 Gene

Evolution for MT1P3 Gene

ENSEMBL:
Gene Tree for MT1P3 (if available)
TreeFam:
Gene Tree for MT1P3 (if available)

No data available for Orthologs for MT1P3 Gene

Paralogs for MT1P3 Gene

No data available for Paralogs for MT1P3 Gene

Variants for MT1P3 Gene

Additional Variant Information for MT1P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MT1P3

SNP Genotyping and Copy Number Assay Products

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MT1P3 Gene

Disorders for MT1P3 Gene

No disorders were found for MT1P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MT1P3 Gene

Publications for MT1P3 Gene

  1. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T … Vidal M (Cell 2014) 3
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3
  4. The DNA sequence and comparative analysis of human chromosome 20. (PMID: 11780052) Deloukas P … Rogers J (Nature 2001) 3
  5. Human metallothionein genes are clustered on chromosome 16. (PMID: 6089206) Karin M … Shows TB (Proceedings of the National Academy of Sciences of the United States of America 1984) 3

Products for MT1P3 Gene

Sources for MT1P3 Gene