Aliases for MT1IP Gene

Aliases for MT1IP Gene

  • Metallothionein 1I, Pseudogene 2 3
  • Metallothionein 1I 2
  • Metallothionein E 3
  • MT1I 3
  • MTE 3
  • MT1 3

External Ids for MT1IP Gene

Previous HGNC Symbols for MT1IP Gene

  • MT1
  • MT1I

Previous GeneCards Identifiers for MT1IP Gene

  • GC16U900670
  • GC16P055268
  • GC16P055269
  • GC16P056709
  • GC16P056679
  • GC16P056688

Summaries for MT1IP Gene

GeneCards Summary for MT1IP Gene

MT1IP (Metallothionein 1I, Pseudogene) is a Pseudogene.

Additional gene information for MT1IP Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MT1IP Gene

Genomics for MT1IP Gene

GeneHancer (GH) Regulatory Elements for MT1IP Gene

Promoters and enhancers for MT1IP Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J056675 Promoter/Enhancer 1.1 EPDnew Ensembl ENCODE 500.7 -0.3 -263 1.1 PRDM10 BHLHE40 POLR2A EZH2 LARP7 ENSG00000275691 MT1IP NONHSAG019539.2 lnc-MT1G-3 piR-41245-097 piR-32559-171 piR-56229-030 MT1X
GH16J056677 Enhancer 0.2 ENCODE 500.7 +1.7 1749 0.9 ENSG00000275691 MT1IP lnc-MT1G-3 MT1X ENSG00000259827 NONHSAG019539.2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MT1IP on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the MT1IP gene promoter:
  • E47
  • RSRFC4
  • Sp1
  • STAT1
  • STAT1alpha
  • STAT1beta
  • STAT2
  • STAT3
  • STAT5B
  • Zic3

Genomic Locations for MT1IP Gene

Genomic Locations for MT1IP Gene
chr16:56,676,116-56,677,877
(GRCh38/hg38)
Size:
1,762 bases
Orientation:
Plus strand
chr16:56,709,649-56,711,653
(GRCh37/hg19)
Size:
2,005 bases
Orientation:
Plus strand

Genomic View for MT1IP Gene

Genes around MT1IP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MT1IP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MT1IP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MT1IP Gene

Proteins for MT1IP Gene

Post-translational modifications for MT1IP Gene

No Post-translational modifications

No data available for DME Specific Peptides for MT1IP Gene

Domains & Families for MT1IP Gene

Gene Families for MT1IP Gene

Suggested Antigen Peptide Sequences for MT1IP Gene

GenScript: Design optimal peptide antigens:
  • Metallothionein (Q86YX3_HUMAN)
genes like me logo Genes that share domains with MT1IP: view

No data available for Protein Domains , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MT1IP Gene

Function for MT1IP Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MT1IP Gene

Localization for MT1IP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MT1IP Gene

Pathways & Interactions for MT1IP Gene

PathCards logo

SuperPathways for MT1IP Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for MT1IP Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MT1IP Gene

Drugs & Compounds for MT1IP Gene

No Compound Related Data Available

Transcripts for MT1IP Gene

mRNA/cDNA for MT1IP Gene

1 REFSEQ mRNAs :
4 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for MT1IP Gene

No ASD Table

Relevant External Links for MT1IP Gene

GeneLoc Exon Structure for
MT1IP

Expression for MT1IP Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for MT1IP

SOURCE GeneReport for Unigene cluster for MT1IP Gene:

Hs.434199
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MT1IP Gene

Orthologs for MT1IP Gene

No data available for Orthologs and Evolution for MT1IP Gene

Paralogs for MT1IP Gene

No data available for Paralogs for MT1IP Gene

Variants for MT1IP Gene

Structural Variations from Database of Genomic Variants (DGV) for MT1IP Gene

Variant ID Type Subtype PubMed ID
dgv2989n100 CNV gain 25217958
dgv524e214 CNV gain 21293372
nsv1058153 CNV gain 25217958

Additional Variant Information for MT1IP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MT1IP

SNP Genotyping and Copy Number Assay Products

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for MT1IP Gene

Disorders for MT1IP Gene

Additional Disease Information for MT1IP

No disorders were found for MT1IP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MT1IP Gene

Publications for MT1IP Gene

  1. Characterisation of six additional human metallothionein genes. (PMID: 8049263) Stennard FA … West AK (Biochimica et biophysica acta 1994) 2 3 54
  2. Human metallothionein genes: structure of the functional locus at 16q13. (PMID: 2286373) West AK … Richards RI (Genomics 1990) 2 3 54
  3. Human metallothionein genes are clustered on chromosome 16. (PMID: 6089206) Karin M … Shows TB (Proceedings of the National Academy of Sciences of the United States of America 1984) 2 3 54
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

Products for MT1IP Gene

Sources for MT1IP Gene