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Aliases for MT-TP Gene

Subcategory (RNA class) for MT-TP Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MT-TP Gene

  • Mitochondrially Encoded TRNA Proline 2 5
  • TRNA Proline 2
  • TRNA 3
  • TRNP 3
  • MTTP 3

External Ids for MT-TP Gene

Previous HGNC Symbols for MT-TP Gene

  • MTTP

Previous GeneCards Identifiers for MT-TP Gene

  • GC00U921609

Summaries for MT-TP Gene

GeneCards Summary for MT-TP Gene

MT-TP (Mitochondrially Encoded TRNA Proline) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with MT-TP include Myoclonic Epilepsy Associated With Ragged-Red Fibers and Myopathy. Among its related pathways are tRNA Aminoacylation.

Additional gene information for MT-TP Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MT-TP Gene

Genomics for MT-TP Gene

Genomic Locations for MT-TP Gene

Genomic Locations for MT-TP Gene
chrMT:15,956-16,023
(GRCh38/hg38)
Size:
68 bases
Orientation:
Minus strand
chrMT:15,956-16,023
(GRCh37/hg19)

Genomic View for MT-TP Gene

Genes around MT-TP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for MT-TP Gene

No data available for GeneHancer (GH) Regulatory Elements for MT-TP Gene

Proteins for MT-TP Gene

Post-translational modifications for MT-TP Gene

No Post-translational modifications

No data available for DME Specific Peptides for MT-TP Gene

Domains & Families for MT-TP Gene

Gene Families for MT-TP Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MT-TP: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MT-TP Gene

Function for MT-TP Gene

Human Phenotype Ontology for MT-TP Gene

HPO Id HPO Name Alternative Ids Definition Synonyms

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MT-TP Gene

Localization for MT-TP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MT-TP Gene

Pathways & Interactions for MT-TP Gene

SuperPathways for MT-TP Gene

SuperPathway Contained pathways
1 tRNA Aminoacylation
genes like me logo Genes that share pathways with MT-TP: view

Pathways by source for MT-TP Gene

1 KEGG pathway for MT-TP Gene

Interacting Proteins for MT-TP Gene

Gene Ontology (GO) - Biological Process for MT-TP Gene

None

No data available for SIGNOR curated interactions for MT-TP Gene

Drugs & Compounds for MT-TP Gene

No Compound Related Data Available

Transcripts for MT-TP Gene

mRNA/cDNA for MT-TP Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MT-TP Gene

No ASD Table

Relevant External Links for MT-TP Gene

GeneLoc Exon Structure for
MT-TP
ECgene alternative splicing isoforms for
MT-TP

Expression for MT-TP Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MT-TP Gene

Orthologs for MT-TP Gene

Evolution for MT-TP Gene

ENSEMBL:
Gene Tree for MT-TP (if available)
TreeFam:
Gene Tree for MT-TP (if available)

No data available for Orthologs for MT-TP Gene

Paralogs for MT-TP Gene

No data available for Paralogs for MT-TP Gene

Variants for MT-TP Gene

Additional Variant Information for MT-TP Gene

Human Gene Mutation Database (HGMD)
MT-TP
SNPedia medical, phenotypic, and genealogical associations of SNPs for
MT-TP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MT-TP Gene

Disorders for MT-TP Gene

MalaCards: The human disease database

(3) MalaCards diseases for MT-TP Gene - From: ClinVar, GTR, and Orphanet

- elite association - COSMIC cancer census association via MalaCards
Search MT-TP in MalaCards View complete list of genes associated with diseases
genes like me logo Genes that share disorders with MT-TP: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for MT-TP Gene

Publications for MT-TP Gene

  1. MtSNPscore: a combined evidence approach for assessing cumulative impact of mitochondrial variations in disease. (PMID: 19758471) Bhardwaj A … Tiwari S (BMC bioinformatics 2009) 3 58
  2. Mitochondrial polymorphisms are associated both with increased and decreased longevity. (PMID: 19077432) Castri L … Madrigal L (Human heredity 2009) 3 58

Products for MT-TP Gene

Sources for MT-TP Gene

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