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Aliases for MRVI1-AS1 Gene

Subcategory (RNA class) for MRVI1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MRVI1-AS1 Gene

  • MRVI1 Antisense RNA 1 2 3 5
  • MRVI1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for MRVI1-AS1 Gene

Summaries for MRVI1-AS1 Gene

GeneCards Summary for MRVI1-AS1 Gene

MRVI1-AS1 (MRVI1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for MRVI1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MRVI1-AS1 Gene

Genomics for MRVI1-AS1 Gene

GeneHancer (GH) Regulatory Elements for MRVI1-AS1 Gene

Promoters and enhancers for MRVI1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I010539 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 585.1 -0.2 -199 2.5 HDGF ARID4B SIN3A YY1 POLR2B E2F8 ZNF207 ZNF143 KLF13 SP3 MRVI1-AS1 RNF141 GC11M010573 GC11M010581
GH11I010538 Enhancer 0.7 Ensembl ENCODE 563.1 -2.0 -1958 0.7 GATA3 FOXA2 FOXA3 FOSL2 FOS FOXA1 MRVI1-AS1 RNF141 GC11M010573 GC11M010581
GH11I010588 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 30.2 +50.8 50782 7.3 HDAC1 ATF1 PKNOX1 TAF9B ARNT TCF12 FOS ETV6 ATF7 NCOA1 MRVI1-AS1 RNF141 MRVI1 AMPD3 LYVE1 GC11M010577
GH11I010525 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 22.8 -13.2 -13165 4.8 PKNOX1 JUNB DPF2 BATF IRF4 ATF2 JUND BCL11A IKZF1 NFATC1 GC11M010573 GC11M010581 MRVI1-AS1 MRVI1 LYVE1 RNF141 AMPD3
GH11I010586 Enhancer 1.1 Ensembl ENCODE dbSUPER 22.5 +45.6 45587 2.2 MEIS2 PKNOX1 ZNF792 ZMYM3 PYGO2 FOSL1 ZNF335 CTBP1 NFE2 FOS MRVI1-AS1 LYVE1 RNF141 MRVI1 CTR9 GC11M010577
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MRVI1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MRVI1-AS1 Gene

Genomic Locations for MRVI1-AS1 Gene
chr11:10,541,236-10,599,932
(GRCh38/hg38)
Size:
58,697 bases
Orientation:
Plus strand
chr11:10,562,787-10,621,479
(GRCh37/hg19)

Genomic View for MRVI1-AS1 Gene

Genes around MRVI1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MRVI1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MRVI1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MRVI1-AS1 Gene

Proteins for MRVI1-AS1 Gene

Post-translational modifications for MRVI1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MRVI1-AS1 Gene

Domains & Families for MRVI1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MRVI1-AS1 Gene

Function for MRVI1-AS1 Gene

Phenotypes From GWAS Catalog for MRVI1-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MRVI1-AS1 Gene

Localization for MRVI1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MRVI1-AS1 Gene

Pathways & Interactions for MRVI1-AS1 Gene

SuperPathways for MRVI1-AS1 Gene

No Data Available

Interacting Proteins for MRVI1-AS1 Gene

Gene Ontology (GO) - Biological Process for MRVI1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MRVI1-AS1 Gene

Drugs & Compounds for MRVI1-AS1 Gene

No Compound Related Data Available

Transcripts for MRVI1-AS1 Gene

mRNA/cDNA for MRVI1-AS1 Gene

(5) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MRVI1-AS1 Gene

MRVI1 antisense RNA 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MRVI1-AS1 Gene

No ASD Table

Relevant External Links for MRVI1-AS1 Gene

GeneLoc Exon Structure for
MRVI1-AS1
ECgene alternative splicing isoforms for
MRVI1-AS1

Expression for MRVI1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MRVI1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for MRVI1-AS1 Gene

This gene is overexpressed in Testis (x26.2).

SOURCE GeneReport for Unigene cluster for MRVI1-AS1 Gene:

Hs.246769
genes like me logo Genes that share expression patterns with MRVI1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MRVI1-AS1 Gene

Orthologs for MRVI1-AS1 Gene

Evolution for MRVI1-AS1 Gene

ENSEMBL:
Gene Tree for MRVI1-AS1 (if available)
TreeFam:
Gene Tree for MRVI1-AS1 (if available)

No data available for Orthologs for MRVI1-AS1 Gene

Paralogs for MRVI1-AS1 Gene

No data available for Paralogs for MRVI1-AS1 Gene

Variants for MRVI1-AS1 Gene

Sequence variations from dbSNP and Humsavar for MRVI1-AS1 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000007875 -- 10,568,554(+) A/C intron_variant
rs1000040027 -- 10,595,051(+) A/G intron_variant
rs1000054149 -- 10,552,095(+) G/A intron_variant
rs1000118203 -- 10,545,850(+) G/A intron_variant
rs1000119272 -- 10,572,873(+) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for MRVI1-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv832063 CNV loss 17160897
nsv819020 CNV loss 19587683
nsv7675 CNV insertion 18451855
nsv1137988 CNV deletion 24896259
nsv1044011 CNV gain 25217958
esv3579367 CNV loss 25503493

Additional Variant Information for MRVI1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MRVI1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MRVI1-AS1 Gene

Disorders for MRVI1-AS1 Gene

Additional Disease Information for MRVI1-AS1

No disorders were found for MRVI1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MRVI1-AS1 Gene

Publications for MRVI1-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for MRVI1-AS1 Gene

Sources for MRVI1-AS1 Gene

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