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Aliases for MRPL53P1 Gene
External Ids for MRPL53P1 Gene
- HGNC: 29725
- Entrez Gene: 359752
- Ensembl: ENSG00000235299
Previous GeneCards Identifiers for MRPL53P1 Gene
- GC01U900140
- GC01M112467
- GC01M112880
- GC01M113169
Summaries for MRPL53P1 Gene
GeneCards Summary for MRPL53P1 Gene
MRPL53P1 (Mitochondrial Ribosomal Protein L53 Pseudogene 1) is a Pseudogene.
Additional gene information for MRPL53P1 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MRPL53P1 Gene
Genomics for MRPL53P1 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for MRPL53P1 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH01J112625 | Enhancer | 0.9 | ENCODE dbSUPER | 600.7 | +0.3 | 281 | 0.1 | JUND PKNOX1 BRD9 DPF2 HDAC1 SOX6 MGA ZNF766 HMBOX1 MTA3 | MRPL53P1 lnc-ST7L-8 RHOC PPM1J CTTNBP2NL CAPZA1 ST7L lnc-ST7L-3 lnc-ST7L-5 RF00017-294 | |
| GH01J112624 | Enhancer | 0.6 | ENCODE dbSUPER | 600.7 | +1.2 | 1191 | 0.2 | ZNF24 GATAD2B ARNT ZNF18 RNF2 | MRPL53P1 lnc-ST7L-8 ST7L lnc-ST7L-3 CAPZA1 lnc-ST7L-5 RF00017-294 MOV10 | |
| GH01J112627 | Enhancer | 0.6 | dbSUPER | 0.7 | -2.8 | -2772 | 2.7 | CEBPA ZBTB44 HMBOX1 ZNF316 TRIM28 TRIM24 SPI1 ADNP CEBPB BRF2 | ST7L MOV10 RHOC PPM1J ENSG00000225075 CTTNBP2NL MRPL53P1 CAPZA1 RNU7-70P RF00066-014 | |
| GH01J112630 | Enhancer | 0.7 | dbSUPER | 0.4 | -6.0 | -5993 | 3.2 | PKNOX1 HDAC1 SOX6 EP300 E2F5 AFF1 WT1 PRDM4 HDAC2 ZNF146 | ST7L MOV10 RHOC PPM1J ENSG00000225075 CAPZA1 RF00066-014 RNU7-70P MRPL53P1 lnc-ST7L-5 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around MRPL53P1 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for MRPL53P1 Gene
Genomic Locations for MRPL53P1 Gene
- chr1:112,625,872-112,626,225
- (GRCh38/hg38)
- Size:
- 354 bases
- Orientation:
- Minus strand
- chr1:113,168,494-113,168,847
- (GRCh37/hg19)
- Size:
- 354 bases
- Orientation:
- Minus strand
Genomic View for MRPL53P1 Gene
Genes around MRPL53P1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 1p13.2 by HGNC
- 1p13.2 by Entrez Gene
- 1p13.2 by Ensembl
MRPL53P1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for MRPL53P1 Gene
Proteins for MRPL53P1 Gene
Post-translational modifications for MRPL53P1 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for MRPL53P1
- Origene Custom Protein Services for MRPL53P1
No data available for DME Specific Peptides for MRPL53P1 Gene
Domains & Families for MRPL53P1 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MRPL53P1 Gene
Function for MRPL53P1 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for MRPL53P1 - Select products 50% OFF >
- * MRPL53P1 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for MRPL53P1
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MRPL53P1 Gene
Localization for MRPL53P1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MRPL53P1 Gene
Transcripts for MRPL53P1 Gene
mRNA/cDNA for MRPL53P1 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000414323 319 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for MRPL53P1 - Select products 50% OFF >
- * MRPL53P1 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for MRPL53P1
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for MRPL53P1 Gene
- GeneLoc Exon Structure for
- MRPL53P1
Expression for MRPL53P1 Gene
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MRPL53P1 Gene
Orthologs for MRPL53P1 Gene
No data available for Orthologs for MRPL53P1 Gene
Paralogs for MRPL53P1 Gene
No data available for Paralogs for MRPL53P1 Gene
Variants for MRPL53P1 Gene
Additional Variant Information for MRPL53P1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- MRPL53P1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MRPL53P1 Gene
Disorders for MRPL53P1 Gene
No disorders were found for MRPL53P1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MRPL53P1 Gene
Publications for MRPL53P1 Gene
- Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome. (PMID: 12706105) Zhang Z … Gerstein M (Genomics 2003) 2 3
ExternalLinks
Products for MRPL53P1 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for MRPL53P1
- Origene Custom Protein Services for MRPL53P1
- Browse OriGene Inhibitory RNA Products For MRPL53P1
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for MRPL53P1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For MRPL53P1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for MRPL53P1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for MRPL53P1
- Search GeneCopoeia for miRNA 3'UTR Target clone products for MRPL53P1
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for MRPL53P1
Sources for MRPL53P1 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB