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Aliases for MRPL45P2 Gene

Aliases for MRPL45P2 Gene

  • Mitochondrial Ribosomal Protein L45 Pseudogene 2 2 3 5

External Ids for MRPL45P2 Gene

Previous GeneCards Identifiers for MRPL45P2 Gene

  • GC17M045871
  • GC17U900364
  • GC17M045528

Summaries for MRPL45P2 Gene

GeneCards Summary for MRPL45P2 Gene

MRPL45P2 (Mitochondrial Ribosomal Protein L45 Pseudogene 2) is a Pseudogene.

Additional gene information for MRPL45P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MRPL45P2 Gene

Genomics for MRPL45P2 Gene

GeneHancer (GH) Regulatory Elements for MRPL45P2 Gene

Promoters and enhancers for MRPL45P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I047491 Promoter/Enhancer 1.5 Ensembl ENCODE 559 -0.1 -115 2.4 HDGF PKNOX1 CLOCK FOXA2 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 MRPL45P2 TBKBP1 ENSG00000266601 ENSG00000263412 NPEPPS
GH17I047941 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 146.1 -449.2 -449237 2 CLOCK MLX DMAP1 YBX1 YY1 SLC30A9 ZNF213 E2F8 ZNF416 SP3 SP2-AS1 PNPO MRPL45P2 UBE2Z EFCAB13 SP2 ENSG00000264701 ENSG00000266601 CDK5RAP3 RPS2P47
GH17I047323 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 41.1 +168.4 168355 2.3 HDGF PKNOX1 SMAD1 ARNT MLX ZFP64 SIN3A DMAP1 YBX1 ZBTB7B EFCAB13 THCAT158 MRPL45P2 RPS7P11 ARL17A ARL17B TBKBP1 ENSG00000264701 RNU7-186P LRRC37A2
GH17I047700 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 50.5 -212.4 -212366 9.3 HDGF PKNOX1 SMAD1 ARNT SIN3A FEZF1 CBX5 E2F8 ZNF263 MCM3 MRPL45P2 TBKBP1 SP2 EFCAB13 ENSG00000253347 ENSG00000266601 RPS7P11 ENSG00000264701 KPNB1 LRRC37A17P
GH17I048011 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 48.7 -520.8 -520811 4.3 HDGF PKNOX1 CLOCK ARNT SIN3A ZNF2 ZBTB7B E2F8 ZNF207 ZNF143 SP2 MRPL45P2 SCRN2 PRR15L ENSG00000264701 UBE2Z EFCAB13 RPS2P47 COPZ2 CDK5RAP3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MRPL45P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MRPL45P2 Gene

Genomic Locations for MRPL45P2 Gene
chr17:47,450,227-47,492,620
(GRCh38/hg38)
Size:
42,394 bases
Orientation:
Minus strand
chr17:45,527,593-45,569,986
(GRCh37/hg19)

Genomic View for MRPL45P2 Gene

Genes around MRPL45P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MRPL45P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MRPL45P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MRPL45P2 Gene

Proteins for MRPL45P2 Gene

Post-translational modifications for MRPL45P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MRPL45P2 Gene

Domains & Families for MRPL45P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MRPL45P2 Gene

Function for MRPL45P2 Gene

Phenotypes From GWAS Catalog for MRPL45P2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MRPL45P2 Gene

Localization for MRPL45P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MRPL45P2 Gene

Pathways & Interactions for MRPL45P2 Gene

SuperPathways for MRPL45P2 Gene

No Data Available

Interacting Proteins for MRPL45P2 Gene

Gene Ontology (GO) - Biological Process for MRPL45P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MRPL45P2 Gene

Drugs & Compounds for MRPL45P2 Gene

No Compound Related Data Available

Transcripts for MRPL45P2 Gene

mRNA/cDNA for MRPL45P2 Gene

(3) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MRPL45P2 Gene

Mitochondrial ribosomal protein L45 pseudogene 2:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MRPL45P2 Gene

No ASD Table

Relevant External Links for MRPL45P2 Gene

GeneLoc Exon Structure for
MRPL45P2
ECgene alternative splicing isoforms for
MRPL45P2

Expression for MRPL45P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MRPL45P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of MRPL45P2 Gene:

MRPL45P2

SOURCE GeneReport for Unigene cluster for MRPL45P2 Gene:

Hs.537279
genes like me logo Genes that share expression patterns with MRPL45P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MRPL45P2 Gene

Orthologs for MRPL45P2 Gene

Evolution for MRPL45P2 Gene

ENSEMBL:
Gene Tree for MRPL45P2 (if available)
TreeFam:
Gene Tree for MRPL45P2 (if available)

No data available for Orthologs for MRPL45P2 Gene

Paralogs for MRPL45P2 Gene

No data available for Paralogs for MRPL45P2 Gene

Variants for MRPL45P2 Gene

Sequence variations from dbSNP and Humsavar for MRPL45P2 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000071926 -- 47,461,046(-) AAAAAAA/AAAAAA intron_variant
rs1000294606 -- 47,453,896(-) A/G intron_variant
rs1000410835 -- 47,491,638(-) C/G intron_variant
rs1000497717 -- 47,455,705(-) A/G intron_variant
rs1000529807 -- 47,460,721(-) G/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for MRPL45P2 Gene

Variant ID Type Subtype PubMed ID
esv2672965 CNV deletion 23128226
esv2758693 CNV gain+loss 17122850
esv33689 CNV loss 17666407
esv3640702 CNV gain 21293372
esv3893027 CNV loss 25118596
nsv1127578 CNV deletion 24896259
nsv1146669 OTHER inversion 26484159
nsv428344 CNV gain 18775914
nsv457821 CNV loss 19166990
nsv469573 CNV gain 16826518
nsv470590 CNV loss 18288195
nsv471513 CNV gain 19718026
nsv471701 CNV gain 15918152
nsv516872 CNV gain+loss 19592680
nsv525267 CNV gain 19592680
nsv575462 CNV loss 21841781
nsv833468 CNV gain 17160897
nsv9566 CNV gain 18304495
nsv960119 CNV duplication 23825009
nsv978433 CNV duplication 23825009

Additional Variant Information for MRPL45P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MRPL45P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MRPL45P2 Gene

Disorders for MRPL45P2 Gene

Additional Disease Information for MRPL45P2

No disorders were found for MRPL45P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MRPL45P2 Gene

Publications for MRPL45P2 Gene

  1. Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome. (PMID: 12706105) Zhang Z … Gerstein M (Genomics 2003) 2 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for MRPL45P2 Gene

Sources for MRPL45P2 Gene

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