Aliases for MRPL23-AS1 Gene

Subcategory (RNA class) for MRPL23-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for MRPL23-AS1 Gene

  • MRPL23 Antisense RNA 1 2 3 5
  • MRPL23-AS1 2 5 165
  • MRPL23 Antisense RNA 1 (Non-Protein Coding) 2 3
  • NONHSAG007407.2 91
  • HSALNG0082176 164

External Ids for MRPL23-AS1 Gene

Additional External Ids for MRPL23-AS1 Gene

Previous GeneCards Identifiers for MRPL23-AS1 Gene

  • GC11M002006

Summaries for MRPL23-AS1 Gene

GeneCards Summary for MRPL23-AS1 Gene

MRPL23-AS1 (MRPL23 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for MRPL23-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MRPL23-AS1 Gene

Genomics for MRPL23-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MRPL23-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MRPL23-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MRPL23-AS1 Gene

Genomic Locations for MRPL23-AS1 Gene
chr11:1,962,798-1,989,967
(GRCh38/hg38)
Size:
27,170 bases
Orientation:
Minus strand
chr11:2,004,439-2,011,150
(GRCh37/hg19)
Size:
6,712 bases
Orientation:
Minus strand

Genomic View for MRPL23-AS1 Gene

Genes around MRPL23-AS1 on UCSC Golden Path with GeneCards custom track
MRPL23-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
MRPL23-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MRPL23-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MRPL23-AS1 Gene

Proteins for MRPL23-AS1 Gene

Post-translational modifications for MRPL23-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MRPL23-AS1 Gene

Domains & Families for MRPL23-AS1 Gene

Gene Families for MRPL23-AS1 Gene

genes like me logo Genes that share domains with MRPL23-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MRPL23-AS1 Gene

Function for MRPL23-AS1 Gene

Phenotypes From GWAS Catalog for MRPL23-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MRPL23-AS1 Gene

Localization for MRPL23-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MRPL23-AS1 Gene

Pathways & Interactions for MRPL23-AS1 Gene

PathCards logo

SuperPathways for MRPL23-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MRPL23-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MRPL23-AS1 Gene

Drugs & Compounds for MRPL23-AS1 Gene

No Compound Related Data Available

Transcripts for MRPL23-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MRPL23-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075DE97_9606 lncRNA 1904 4

HGNC: 42812,

RefSeq: NR_024471,

LNCipedia: MRPL23-AS1:4,

NONCODE: NONHSAT017453.2,

URS00002381C3_9606 lncRNA 1876 2

Ensembl: ENST00000419080 (view in UCSC) , ENST00000673368 (view in UCSC) ,

LNCipedia: MRPL23-AS1:3,

URS00008B7FA4_9606 lncRNA 996 3

LncBook: HSALNT0171118,

LNCipedia: MRPL23-AS1:5,

NONCODE: NONHSAT017456.2,

URS00008B62A0_9606 lncRNA 2609 2

LNCipedia: MRPL23-AS1:1,

NONCODE: NONHSAT017452.2,

URS00008BBE09_9606 lncRNA 2214 2

LNCipedia: MRPL23-AS1:6,

NONCODE: NONHSAT017454.2,

MRPL23-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for MRPL23-AS1 Gene

No ASD Table

Relevant External Links for MRPL23-AS1 Gene

GeneLoc Exon Structure for
MRPL23-AS1

No data available for mRNA/cDNA for MRPL23-AS1 Gene

Expression for MRPL23-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MRPL23-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for MRPL23-AS1 Gene

This gene is overexpressed in Muscle - Skeletal (x5.2).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for MRPL23-AS1

SOURCE GeneReport for Unigene cluster for MRPL23-AS1 Gene:

Hs.677620
genes like me logo Genes that share expression patterns with MRPL23-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MRPL23-AS1 Gene

Orthologs for MRPL23-AS1 Gene

Evolution for MRPL23-AS1 Gene

ENSEMBL:
Gene Tree for MRPL23-AS1 (if available)
TreeFam:
Gene Tree for MRPL23-AS1 (if available)

No data available for Orthologs for MRPL23-AS1 Gene

Paralogs for MRPL23-AS1 Gene

No data available for Paralogs for MRPL23-AS1 Gene

Variants for MRPL23-AS1 Gene

Additional dbSNP identifiers (rs#s) for MRPL23-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for MRPL23-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv1015n100 CNV gain 25217958
dgv1016n100 CNV gain 25217958
esv29980 CNV loss 17803354
nsv1047474 CNV gain 25217958
nsv467645 CNV gain 19166990
nsv469926 CNV loss 18288195
nsv516622 CNV loss 19592680
nsv522320 CNV loss 19592680
nsv553047 CNV gain 21841781
nsv553064 CNV loss 21841781
nsv951283 CNV deletion 24416366

Additional Variant Information for MRPL23-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MRPL23-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for MRPL23-AS1 Gene

Disorders for MRPL23-AS1 Gene

No disorders were found for MRPL23-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MRPL23-AS1 Gene

Publications for MRPL23-AS1 Gene

  1. Long Noncoding RNA MRPL23-AS1 Promoteoid Cystic Carcinoma Lung Metastasis. (PMID: 32098781) Chen CW … Ge XY (Cancer research 2020) 2 3
  2. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3

Products for MRPL23-AS1 Gene

Sources for MRPL23-AS1 Gene