Aliases for MRPL20P1 Gene

Aliases for MRPL20P1 Gene

  • Mitochondrial Ribosomal Protein L20 Pseudogene 1 2 3 5
  • MRPL20P1 5

External Ids for MRPL20P1 Gene

Previous GeneCards Identifiers for MRPL20P1 Gene

  • GC21U900049
  • GC21P037287
  • GC21P037288
  • GC21P038366
  • GC21P023842

Summaries for MRPL20P1 Gene

GeneCards Summary for MRPL20P1 Gene

MRPL20P1 (Mitochondrial Ribosomal Protein L20 Pseudogene 1) is a Pseudogene.

Additional gene information for MRPL20P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MRPL20P1 Gene

Genomics for MRPL20P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MRPL20P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J036994 Promoter/Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 600.7 +0.3 293 0.7 CTCF POLR2A ZBTB33 TAF1 EZH2 MRPL20P1 HLCS PIGP TTC3 RF00017-3707 RIPPLY3
GH21J036993 Enhancer 0.3 Ensembl 600.7 -1.5 -1457 0.2 ZBTB33 MRPL20P1 HLCS TTC3 PIGP RIPPLY3
GH21J037059 Enhancer 1.2 Ensembl ENCODE CraniofacialAtlas 11.5 +66.7 66724 3.4 CREB1 GATAD2A PRDM10 ZNF629 RFX1 ZNF692 ZNF7 JUND FOXA1 ZIC2 PIGP TTC3 MRPL20P1 ENSG00000207416 HLCS LOC105372795-001 piR-53029-077 lnc-TTC3-4 RIPPLY3
GH21J036917 Enhancer 1.2 Ensembl ENCODE CraniofacialAtlas 10.3 -76.9 -76857 2.6 CREB1 GATAD2A CTCF TFE3 FOXA1 RXRB REST RAD21 IRF2 SP1 ENSG00000207416 HLCS MRPL20P1 piR-32214-430 lnc-PIGP-4 SIM2
GH21J037152 Enhancer 1.1 Ensembl ENCODE 9.9 +159.6 159643 3.6 GATAD2A REST TFE3 RCOR2 ZNF7 RXRB IRF2 SP1 CEBPA FOXK2 TTC3 HLCS MRPL20P1 ENSG00000207416 ENSG00000273199 MN309174-436 piR-39858-415 L13712-020 VPS26C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MRPL20P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MRPL20P1 Gene

Genomic Locations for MRPL20P1 Gene
chr21:36,994,558-36,995,248
(GRCh38/hg38)
Size:
691 bases
Orientation:
Plus strand
chr21:38,366,867-38,367,544
(GRCh37/hg19)
Size:
678 bases
Orientation:
Plus strand

Genomic View for MRPL20P1 Gene

Genes around MRPL20P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MRPL20P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MRPL20P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MRPL20P1 Gene

Proteins for MRPL20P1 Gene

Post-translational modifications for MRPL20P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MRPL20P1 Gene

Domains & Families for MRPL20P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MRPL20P1 Gene

Function for MRPL20P1 Gene

Phenotypes From GWAS Catalog for MRPL20P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MRPL20P1 Gene

Localization for MRPL20P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MRPL20P1 Gene

Pathways & Interactions for MRPL20P1 Gene

PathCards logo

SuperPathways for MRPL20P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MRPL20P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MRPL20P1 Gene

Drugs & Compounds for MRPL20P1 Gene

No Compound Related Data Available

Transcripts for MRPL20P1 Gene

mRNA/cDNA for MRPL20P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MRPL20P1 Gene

No ASD Table

Relevant External Links for MRPL20P1 Gene

GeneLoc Exon Structure for
MRPL20P1

Expression for MRPL20P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MRPL20P1 Gene

genes like me logo Genes that share expression patterns with MRPL20P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MRPL20P1 Gene

Orthologs for MRPL20P1 Gene

Evolution for MRPL20P1 Gene

ENSEMBL:
Gene Tree for MRPL20P1 (if available)
TreeFam:
Gene Tree for MRPL20P1 (if available)

No data available for Orthologs for MRPL20P1 Gene

Paralogs for MRPL20P1 Gene

No data available for Paralogs for MRPL20P1 Gene

Variants for MRPL20P1 Gene

Additional Variant Information for MRPL20P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MRPL20P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MRPL20P1 Gene

Disorders for MRPL20P1 Gene

No disorders were found for MRPL20P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MRPL20P1 Gene

Publications for MRPL20P1 Gene

  1. Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome. (PMID: 12706105) Zhang Z … Gerstein M (Genomics 2003) 2 3

Products for MRPL20P1 Gene

Sources for MRPL20P1 Gene